Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car18g00648 ATGAAGCTTCTTATTCTTGCCACCCTCACAATAAGCTCACTCCTCTTCCCTTTCACCTTCCTCAATTTCCTCTTTTGCTCTCTCCTCGCCCTCTCTCTCAGCTTCTGGCTCATCCCCGGTGGGTTTGCATGGCGCAACCACCACCGCTCCTCAGCCAACCTTCCCGGCCCCTCTGGCTGGCCGTTACTCGGAACGCTCCCGCAAATGGGGCCACTCGCTCACCGAAATCTCGCTGCCATTGCACACTCCTTCAAAGCCACTCGTCTCATGTCCTTCAGCTTGGGTACCACTAGAGCCATCATAAGTAGTCACCCCGACACGGCCAAGCAGATCCTCTGTAGCTCAGCTTTCTCCGACCGCCCCGTCAAGCAATCAGCTCGACTCATGATGTTCGAGCGAGCCATCGGTTTCGCTCCCAATGGAGTCTATTGGCGTAATCTTCGACGAATCGCTGCAAACCACATGTTTTCCCCACGAAGAATCTCCGACTTGGAAGGGCTCAGAAGAGAGGTCGGCGTTGAAATGACAGAGGAGATGTCGAGAAATATGGCCGTTGACGGGGTAGTGAGGCTAAGAGAAGTCCTCCAGAAGCATACGCTGAAGAACATAATAGAGAGCGTGTTTGGAAGTGATTTTAAAACGGAAAGAAAGAATCAACTTAGTGAAATGGTGAGAGAAGGGTATGAATTGATAGCTATGTTCAATTGGGAAGATCATTTTCCGGTCAGTTTCTTGGATTTTGGTGGAGTGAAAAGGAAGTGCCATGAATTGGCGGGCAGGGTTAGTGTAGCAGTCGGGCAGATTGTTGAAGAGAGAAAAAGAGACAAAAATGAGGCGAAAAATGACTTTCTTAGTGCTTTGCTTACTTTACCAAAGGAGGATCAGCTGAATGATTCAGACATGGTGGCTGTTCTATGGGAAATGATATTTCGTGGAACCGATACGATTGCCATACTCTTAGAATGGATCATGGGCAGGTTGATATTACACCCAGAAATCCAAGCCAAAGCTCGAGAGGAGATCGACACGTGTGTAGGTTCCAACAGGCACGTGCGTGATTCCGACATTCCCAACCTTCCTTACCTCCAAGCTATAGTAAAGGAAGTTCTCCGTTTACACCCTCCAGGTCCATTACTGTCGTGGGCCCGTCTGGCAATCCATGATGTCCACGTGGACAAGGTCTTAATCCCAGCTGGCACCACGGCAATGGTGAACATGTGGGCCATAGCTCATGACCCTTCCATATGGAAAGACCCATGGACATTCCGGCCAGAGCGGTTCATTGAAGACGACATGTCGATTATGGGTTCGGATTTGAGGCTGGCGCCGTTCGGTGCTGGGCGGAGGGCGTGCCCGGGAAGGGCGTTGGGTCTAGCCACTGTGCATCTATGGTTAGCCACTTTTGTGCAACGGTTCGAATGGGTTCCGTGTTCGACAAAGCCGGTTAATTTGTCGGAATGTTTGAAGCTGTCCCTTGAAATGAAGAAAGCTTTGGAGTGTTGTGTGGTTAGTCGGTGA 1518 50.33 MKLLILATLTISSLLFPFTFLNFLFCSLLALSLSFWLIPGGFAWRNHHRSSANLPGPSGWPLLGTLPQMGPLAHRNLAAIAHSFKATRLMSFSLGTTRAIISSHPDTAKQILCSSAFSDRPVKQSARLMMFERAIGFAPNGVYWRNLRRIAANHMFSPRRISDLEGLRREVGVEMTEEMSRNMAVDGVVRLREVLQKHTLKNIIESVFGSDFKTERKNQLSEMVREGYELIAMFNWEDHFPVSFLDFGGVKRKCHELAGRVSVAVGQIVEERKRDKNEAKNDFLSALLTLPKEDQLNDSDMVAVLWEMIFRGTDTIAILLEWIMGRLILHPEIQAKAREEIDTCVGSNRHVRDSDIPNLPYLQAIVKEVLRLHPPGPLLSWARLAIHDVHVDKVLIPAGTTAMVNMWAIAHDPSIWKDPWTFRPERFIEDDMSIMGSDLRLAPFGAGRRACPGRALGLATVHLWLATFVQRFEWVPCSTKPVNLSECLKLSLEMKKALECCVVSR 505
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
18 7740965 7743255 - Carg21231-RA Car18g00648 166350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car18g00648 505 Pfam Cytochrome P450 55 490 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Car18g00648 505 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 444 453 IPR017972 GO:0005506|GO:0016705
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car04g01384 Car-Chr4:8020492 Car18g00648 Car-Chr18:7740965 3.88E-17 dispersed
Car13g00900 Car-Chr13:9369615 Car18g00648 Car-Chr18:7740965 0 dispersed
Car17g00464 Car-Chr17:3250213 Car18g00648 Car-Chr18:7740965 3.35E-173 dispersed
Car18g00648 Car-Chr18:7740965 Car20g00945 Car-Chr20:10760720 3.88E-162 dispersed
Car18g00648 Car-Chr18:7740965 Car05g00399 Car-Chr5:2272347 0 transposed
Car18g00648 Car-Chr18:7740965 Car12g00103 Car-Chr12:552560 0 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car18g00648 - - csv:101212611 866.3