Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car18g00655 ATGTACAAGAAACTCGCTGCAATTTATTGCCAGGTTATGTCAATTTTCCCTTCCTTGGAAGCAGCAAGACCTAGGAGCAAAACTGGTATTCAGGCTTTATGTTCATTGCATGTAGCTCTTGAGAAGGCCAAGAATACTCTTCGGCACTGCTCGGAATCCAGTAAACTCTACTTGGCTATAACTGGAGATGCTGTTCTAGCCAAATTTGAAAAGTCAAGATGTTCTCTTGAAGTTAGTCTTGTATGCGTTGAAGATATTGTTTCAGAATCAATTGGATTTCAGATTCAGCAGATAGTGGACGAACTAAAGAACATTGTTTTTTTACTTGACCCACTCGAGAAACAAGTTGGTGATGATATCATTGCATTACTCCTGCAAGAAAGAAAATTTGATGATTCCAATGGTCATAATGAGCTGGAGCATTTTCATCAGGCCGCCACGAAACTGGGAATTACATCCTCCAAAGCAGCCCTCACAGAGAGGAGAGCTCTTAAGAGACTCGTAGAACGAGCTCGCTTAGAAGAAGACAAGCGAAAGGAATCAATTGTAGCTTACCTTTTGCATCTCATGAGGAAGTATTCTAAGTTATTTAGAACCGAGTTGTCAGATGACACTGACTCACAGGGAGGATCAACTCCTTGTTCTCCTACTGTTCGGTGTTCTCTTGGGGACAATGGACCTACAGCCAACGGCCGAATGTTTGAACATCAGCTCTCAAAGCTCAGTTCTTTCAATTTCAAGCCAAATTATAGGATATCAGGGCAAATGCCTCTTCCACCTGAGGAATTGAGGTGTCCAATATCATTGCAGCTTATGTACGACCCTGTCATAATTGATTCCGGGCAAACATATGAAAGGATCTGCATTGAGAAATGGTTCAGTGATGGTCACAAAATCTGCCCGAAGACTCAATATTGGCTCTCCCATCTGTCCTTGACACCTAATTACTCTGTCAAAGGTCTTACTGCTAATTGGTGTGAATCTAACGGAGTTCCTATCCCTGACGGTCCACCAAAGTCGCTTGATCTGAATTATTGGAGGCTTGCACTGTCTGATTCCGAGTCTGGACAATCAAGATCTGTGGACAAAGTTGGCTCTTGCATGTTGAAGGAAGTTAAGATAGTTCCTTTGGAGGAAAGTGGAACAATAAAGGTTGTTGAAGAAAATGAAGCAGAGGATAATACATACATGGAGGAATCATCTGATTTTATTACACTGGAGAGTTGTGTAAATTTTATGACAGTATTGACCGAAGAGGGCGACTTGAGTAAAAAATGCAAGGTTGTGGAGCAGATAAGACTTTTACTCAAGGATGATGATGAAGCTCGAATTTTGATGGGAGCCAATGGCTTTCCTGAAGCACTCATGGAATTCCTAACTTTAGCTCTTATTGAAGAAAACGCCGATGCTCAGGAAAGTGGAGCCATGGCTCTCTTCAATCTTTCTGTCAACAACAACAGAAACAGGGAAATGATGCTAGCAGCAGGTGTAATCTCGTTGTTGGAGAACATGATTTTGAAATCCAATTTACATGGACCTGCAACAGCCTTATATTTGAATCTTTCCTGCCTAGAAGATGCCAAACCTATCATTGGCTCTAGTAGAGCTGTTCCTTTCCTTATCCAGCTGCTTACTTCTAATGGTGAATCCCAAACGAAGCTCGATGCGCTTCACACCCTTTACAACCTCTCGACCACGCCCTCCATTGTCCCCGTTCTTCTTTCCTCCGCCATCATTGATGGACTTCAATCCTTTTTTGCAACTCCCAGTGACAACTTATCGACTGAGACTTCCTTAGCTATCTTAATAAACTTAGCTTCAAGCCAGTTGGGGATAGAAGAAATAACCTCAGCCCCAGATCTTATCAGCGGGTTGGCAGCAATCGTGGATGCTGGCGAACGTGCCGAGCAGGAGCAAGCTGTCTCGTGTTTGTTGCTTTTGTGTAGAGGGAGTGAAAAATGCAGTCAAATGGTGTTACAGGAAGGAGTGATTCCTGGATTAGTGGCGATTACGGTAAACGGGACGTCGAGAGGGAAGATAAAAGCTCAGAAGCTTCTGATGTTGTTTAGGGAGCAGAGGCAAAAGGATACCGATCTCGGCCAGCAGCGAGAGCGAGATGGAAATAGCAACGCAACCATGGCTGTTCCAGAACCAAAAACTCTATGCAAATCAGTATCAAAGAAAAAGATGGGGAAAGCATTAAGCTTTTTTGGGAAGAGTGGAGAAGAAGCGAACAAAGGTACGCTCGCTTCCTGTCTTGTTCTCTGT 2268 43.3 MYKKLAAIYCQVMSIFPSLEAARPRSKTGIQALCSLHVALEKAKNTLRHCSESSKLYLAITGDAVLAKFEKSRCSLEVSLVCVEDIVSESIGFQIQQIVDELKNIVFLLDPLEKQVGDDIIALLLQERKFDDSNGHNELEHFHQAATKLGITSSKAALTERRALKRLVERARLEEDKRKESIVAYLLHLMRKYSKLFRTELSDDTDSQGGSTPCSPTVRCSLGDNGPTANGRMFEHQLSKLSSFNFKPNYRISGQMPLPPEELRCPISLQLMYDPVIIDSGQTYERICIEKWFSDGHKICPKTQYWLSHLSLTPNYSVKGLTANWCESNGVPIPDGPPKSLDLNYWRLALSDSESGQSRSVDKVGSCMLKEVKIVPLEESGTIKVVEENEAEDNTYMEESSDFITLESCVNFMTVLTEEGDLSKKCKVVEQIRLLLKDDDEARILMGANGFPEALMEFLTLALIEENADAQESGAMALFNLSVNNNRNREMMLAAGVISLLENMILKSNLHGPATALYLNLSCLEDAKPIIGSSRAVPFLIQLLTSNGESQTKLDALHTLYNLSTTPSIVPVLLSSAIIDGLQSFFATPSDNLSTETSLAILINLASSQLGIEEITSAPDLISGLAAIVDAGERAEQEQAVSCLLLLCRGSEKCSQMVLQEGVIPGLVAITVNGTSRGKIKAQKLLMLFREQRQKDTDLGQQRERDGNSNATMAVPEPKTLCKSVSKKKMGKALSFFGKSGEEANKGTLASCLVLC 756
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
18 7816975 7820350 + Carg21238-RA Car18g00655 166357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car18g00655 756 ProSiteProfiles U-box domain profile. 258 332 IPR003613 GO:0004842|GO:0016567
Car18g00655 756 Pfam U-box domain 260 329 IPR003613 GO:0004842|GO:0016567
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car04g01836 Car18g00655 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car16g00655 Car-Chr16:4158012 Car18g00655 Car-Chr18:7816975 1.27E-71 dispersed
Car18g00382 Car-Chr18:2346021 Car18g00655 Car-Chr18:7816975 1.56E-12 dispersed
Car18g00655 Car-Chr18:7816975 Car01g00541 Car-Chr1:3209827 1.49E-48 dispersed
Car12g00061 Car-Chr12:256711 Car18g00655 Car-Chr18:7816975 0 wgd
Car18g00655 Car-Chr18:7816975 Car04g01836 Car-Chr4:10633185 0 wgd
Car18g00655 Car-Chr18:7816975 Car05g00070 Car-Chr5:365427 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car18g00655 - - csv:101210079 1291.56