Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car18g00664 ATGGATGACGAGATCGGTGAAGAGTTCAAGAGAAGTGGTTTCACGTTCGATGAAGAGGAAGAGATTCTCAATAAATGTGTTACGTTCTGTGTTAATTATAGTCTAAAGCCTTCGGATATAGTTTCTAGCTGGGAAGTCTACTATCTCAACAGGCAATTAGATGGGTCAATTGTACAAATTGCACAGATGGATGGGTTTTTACAACATTTACAGAATGAGCAAAAAGAAGCAATCATTAAAGAGGAACCAGACCTTCATGTTTATTCGAGCAAAGATGTGGACATGATTTTGAATGATGAGGATGAAGATCCAAAGGAAGACATTCTTAAAACTCCAAATGGGAAATCTCAGGGCCTCCACAAGGATCGATTTGATTTGACCCCTTACACAAATGAAGGCTTGTTCTCTTCAGGAAAACCTTCAAAGCATGTGACACCCTTCGGCCAAAGAACAGAAAAATTTGCTGTGAGGTTCAGCATTAATAATGTGCCTGATAAGGAGACTGCTGAGATGGAAGATAATTGCGAGAATGATGAAGATGCAATCATCAAGAAGGTTCTACCCCTGCAAGGATGCTCCCTGACAGTCCATGGATCAGGATTTGGACTTGAACCAAATTGCAGGTTCATGTATGACAGGGTTGAAGATAGGTTTAATGCACTAGAAAACCGAATCGTGAAGCATGCAAAAGCTCTTGTTGCATCTGGGTTCTATGAAGAAGTAGTGGACCCTACGGTTGCTTCGCAGAAAAGCATGTTTGCAGTAGGCATGATTTGTTGTGATGGTGATGGACACTTGAACGATAAGTCCACCATGTTGCAAAGCAGTGTTGAACACTCAGGGGGGCAGCGGGTTCGTTTAGAATTACAAAACTTAAGCCAGTTTTCAATCTTTCCTGGCCAGGTAGTAGGTATTGAAGGGCATAATCCTAGTGGACACTGCTTGATAGCATCCAAACTTGTAGATTCATTTCCTTTGTCTGCCACTATCGATCCCATTCTTCCTCCAGCAAAGAAGATAGCTTTGGACCATGATATCCAGCCAATTAATCAACCTTCTACAGAGTCAGAATTATCAATGATTATTGCATCAGGCCCCTATACAACGACAGACAACATATTGTTTGAGCCTTTGACAGAGTTACTAGCATATGCAAAAAGAAAGCCTCCTCAGCTACTAATATTGCTTGGGCCATTTGTTGATTCTGAACATTCTGATATCAAGAGAGGCACGGTAGCGATGAGCTTTGAGGAAATTTTCAACTTTGAAGTTCTCAGAAGGGTGCAAGATTATGTAGAACACATGGGTCCTGATGCACGTGTACTTTTGATGCCATCTATTAGGGATGCTAATCACGACTTTGTTTTTCCTCAGCCTGCTTTTGACATTCCATCTGATCTAAGACTTCAGATATCTAGTCTCCCGAACCCAGGCATTTTGGAAGCAAATCAGGCAAAGATAGCCTGCTGCACCATGGATATCCTCAGACACCTTAGTGGAGAAGAGCTGTCAAGAAATCTAACAAAGGGAACAGCCAACGACCGTCTGAGCACACTTGCAAGTCATATCCTCCGGCAGCGCAGGCATGTCTTCTTTTATCCTCTATACCCTCCGGCCGAAGGAGTGCCACTCGACTTTTCGCTTGCCCCAAAAGCTCTCGACATCTCTGTAATACCCGATATTCTCATTCTTCCATCCGACATGAAACACTTCGTGAAGGTTATATCTCTTGGTGAGGGACGTGCGGATGAAGAACGAGCGAACTGCGTGTGTGTGAATCCAGGAAGATTGGCCAAGGGTGAAGGAGGAGGTACTTTTGTAGAGCTTAAGTACTTCGGTACGCCTGACAAGATAAACGCTGCAGTTGTCAGCATATGA 1878 43.18 MDDEIGEEFKRSGFTFDEEEEILNKCVTFCVNYSLKPSDIVSSWEVYYLNRQLDGSIVQIAQMDGFLQHLQNEQKEAIIKEEPDLHVYSSKDVDMILNDEDEDPKEDILKTPNGKSQGLHKDRFDLTPYTNEGLFSSGKPSKHVTPFGQRTEKFAVRFSINNVPDKETAEMEDNCENDEDAIIKKVLPLQGCSLTVHGSGFGLEPNCRFMYDRVEDRFNALENRIVKHAKALVASGFYEEVVDPTVASQKSMFAVGMICCDGDGHLNDKSTMLQSSVEHSGGQRVRLELQNLSQFSIFPGQVVGIEGHNPSGHCLIASKLVDSFPLSATIDPILPPAKKIALDHDIQPINQPSTESELSMIIASGPYTTTDNILFEPLTELLAYAKRKPPQLLILLGPFVDSEHSDIKRGTVAMSFEEIFNFEVLRRVQDYVEHMGPDARVLLMPSIRDANHDFVFPQPAFDIPSDLRLQISSLPNPGILEANQAKIACCTMDILRHLSGEELSRNLTKGTANDRLSTLASHILRQRRHVFFYPLYPPAEGVPLDFSLAPKALDISVIPDILILPSDMKHFVKVISLGEGRADEERANCVCVNPGRLAKGEGGGTFVELKYFGTPDKINAAVVSI 625
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
18 7869909 7875243 - Carg21247-RA Car18g00664 166366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car18g00664 625 Pfam DNA polymerase alpha/epsilon subunit B 361 573 IPR007185 GO:0003677|GO:0006260
Car18g00664 625 Coils Coil 211 231 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car18g00664 Car-Chr18:7869909 Car04g01828 Car-Chr4:10594035 5.42E-08 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car18g00664 K02321 - csv:101206268 1106.66