Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car18g00715 ATGAAACCTCACGATTTCTCCTTCTTGATCCGAGTTCTTTTGATTCTCTTGTTTCGTTTTGTAATTCAGTCTGCGGCTGATCCGAGAGCCACTGAGGTGGCTCTCATATGTTCGAACAACACCGCTTCGCCGCTGGAGCGATCTACCTTCGTGACGAATTTCTTGGCGACGATGGATGCGGTTACTCCTCTTATTGCTTCACAGCGATTTGCAAACGTTGTGAACGGGACTGGAAATACGACGGTTTATGCGTTTGGTCAGTGTATGAATGATCTTACTCAATCGGACTGCGATCTCTGTTTCGCGCAGATGAAAACTCAGATCCTGCGGTGTCTTCCCTTTCAGCTTGCTACTCGCGGAGGTAGACTGTTCTATGATGGATGCTATGTTAGGTATGATTATTATAATTTCTTCAATGAATCTTTGAGTGCTGTGGATAGGCCTGTATGTGGGAAGGTGGATTATGGAGGGAATCGGACCATTTTTAGTGATAACGCTATGAAATTAGCGAGGAATTTGAGTGTAGTAGCGCCCAAGAACGATGGATTTGCTGTAGGATTGGTGGATTTTAGGAATGTCTCGGTTTATGGATTGGCTCAGTGTTGGAAATTTGTGAGAGGGGACTCTTGCTCGAAGTGTTTGGCTGATGCAGCTAAGGAAATTGCTACCTGTCCTCCAAAAGCCGATGGAAGGGTGCTGAATGCTGGCTGCTTCTTCAGATATTCAACTGAACGATTCTACTTCAATAGCACGGCGACCGCCACCGGAGGAAATGGAAGGAGTCGTCTAGCGATAATTTTGGCTTCGGTATCGGCTGCTGTGGCTGCTGCATTGATTTTTGCAACGGCTGTTTTCTGTGCCAGAAGGAAAGTAGTGAGGAAGCGCAGAGAGAAGAAGCAACTTGGTCCTCTTGTGGCTCTTGTTAACAAGTCCAAGCTTAATTTTTCATACGAGACCCTTGAGAGGGCCACTAATTACTTCGACCAATCCAATAAACTTGGACAAGGAGGCTCTGGTTCAGTTTATAAGGGAACTCTGTCAGATGGTCGAGTCGTAGCAATCAAGAGGCTGTTCTTCAACACGAGACAATGGGTGGATCATTTCTTTAATGAAGTAAACTTGATAAGTGGCATCCGACACAAAAATCTTGTCGGGCTGTTGGGATGCAGTATTACTGGTCCTGAAAGCCTCCTTGTTTATGAATATGTGCCAAATCAAAGCCTGCACGATTACCTTTTTGGTAACAAGAACGTGCAGCCACTGAGTTGGGCATCCAGGTTTAAGATTGTGTTGGGAACAGCTGAAGGGTTGGCTTATCTTCATGAGGAGTCAGATTTGAAAATCATTCATCGGGACATAAAGTTAAGCAATATTCTACTGGACAATGATTTCACTCCAAAGATTGCTGATTTTGGACTTGCTAGAATGCTTCCTGAAGATAAGACACACATTAGCACTGCAATTGCTGGCACACTAGGTTACATGGCTCCCGAGTATGTAGTACGTGGAAAGTTGTCTGAGAAGGCCGATGTTTACAGTTTTGGAGTTTTTGCCATTGAAGTTATCACAGGAAGGAGGAATGGTCACTTCTATCAAGATTCAACCTCCATCTTACAAAGGGTATGGAATTTTTATGGAGAGGGAAGGCTATATGCAGCTGTCGATCCTACCCTTGGAGGCGATTATCCACGAGACCAAGCGTCGTGGTTGCTCCAAATAGGTCTAGTTTGTGTGCAAGCCTTTGCTGACTTAAGGCCATCCATGTCAATGGTTGTGAAAATGCTTAATGGAAACTATGAGATTCCCCAGCCAAAACAGCCTCCATATCTTCATCCTTCAAGCGGAGACATCAAAAAACACAATTCATCAGACTCATCCAATCCCAATCTCTACTCCAACTCGAAAAATTCACAAACTAGCATGACTCAAAGCATCATCGATCCTAGATGA 1950 44.51 MKPHDFSFLIRVLLILLFRFVIQSAADPRATEVALICSNNTASPLERSTFVTNFLATMDAVTPLIASQRFANVVNGTGNTTVYAFGQCMNDLTQSDCDLCFAQMKTQILRCLPFQLATRGGRLFYDGCYVRYDYYNFFNESLSAVDRPVCGKVDYGGNRTIFSDNAMKLARNLSVVAPKNDGFAVGLVDFRNVSVYGLAQCWKFVRGDSCSKCLADAAKEIATCPPKADGRVLNAGCFFRYSTERFYFNSTATATGGNGRSRLAIILASVSAAVAAALIFATAVFCARRKVVRKRREKKQLGPLVALVNKSKLNFSYETLERATNYFDQSNKLGQGGSGSVYKGTLSDGRVVAIKRLFFNTRQWVDHFFNEVNLISGIRHKNLVGLLGCSITGPESLLVYEYVPNQSLHDYLFGNKNVQPLSWASRFKIVLGTAEGLAYLHEESDLKIIHRDIKLSNILLDNDFTPKIADFGLARMLPEDKTHISTAIAGTLGYMAPEYVVRGKLSEKADVYSFGVFAIEVITGRRNGHFYQDSTSILQRVWNFYGEGRLYAAVDPTLGGDYPRDQASWLLQIGLVCVQAFADLRPSMSMVVKMLNGNYEIPQPKQPPYLHPSSGDIKKHNSSDSSNPNLYSNSKNSQTSMTQSIIDPR 649
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
18 8355334 8359207 + Carg14483-RA Car18g00715 166417
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car18g00715 649 ProSitePatterns Protein kinases ATP-binding region signature. 333 355 IPR017441 GO:0005524
Car18g00715 649 Pfam Protein kinase domain 328 526 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car18g00715 649 Pfam Salt stress response/antifungal 158 243 IPR002902 -
Car18g00715 649 Pfam Salt stress response/antifungal 37 133 IPR002902 -
Car18g00715 649 ProSiteProfiles Gnk2-homologous domain profile. 31 137 IPR002902 -
Car18g00715 649 MobiDBLite consensus disorder prediction 603 649 - -
Car18g00715 649 MobiDBLite consensus disorder prediction 619 649 - -
Car18g00715 649 ProSiteProfiles Protein kinase domain profile. 327 610 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car18g00715 649 ProSiteProfiles Gnk2-homologous domain profile. 143 246 IPR002902 -
Car18g00715 649 ProSitePatterns Serine/Threonine protein kinases active-site signature. 448 460 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car16g00424 Car-Chr16:2649297 Car18g00715 Car-Chr18:8355334 4.21E-85 dispersed
Car18g00715 Car-Chr18:8355334 Car03g00466 Car-Chr3:4999507 6.86E-100 dispersed
Car12g00788 Car-Chr12:7582924 Car18g00715 Car-Chr18:8355334 2.39E-55 transposed
Car14g00601 Car-Chr14:3346716 Car18g00715 Car-Chr18:8355334 0 transposed
Car12g00022 Car-Chr12:119249 Car18g00715 Car-Chr18:8355334 8.67E-141 wgd
Car18g00715 Car-Chr18:8355334 Car05g00027 Car-Chr5:149238 2.34E-07 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
89529 PF00069 Pkinase 7.50E-44 CL0016 Car PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car18g00715 - - csv:101218749 1131.7