Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car18g00717 ATGGAAGAAATGTACGGTTTGCAATCGACGGCGGAGTATTCTGATAAGGCGTTGATGTCACCGGAGAATCTGATTCTGCCTCCGGATTATCAGAGCCTACTGGTTAGTTCTGGAGAGTTTCGCGATCGGATTCCGGTGTTTGGATCCAACGAACTGCTTTCGGCGGCGGCTTCGGTGATTTCGGAAGCTGAAGCAGCGTCGATCACGATGGAAATTCAATGTGAAGAAGATATGGTGAACGTGATCAAAGCTAAAATTTCTTCTCATCCTACTTATCCTCGATTGCTCGACGCCTATATTGACTGCCAAAAGGTAGGAGCGCCTCCGGCGATTTCACATTTGTTAGAGGGAATCCGTCAAGAAAGCGACATTTGTAACCGTCACGCTGTAACCACGTGCTTAGGCGTCGATCCTGAACTCGATGAATTCATGGAAACGTACTGCGATATGTTGGTGAAGTACAAATCAGATCTCAAGAGGCCCTTCGACGAAGCAACCACGTTCTTGAATAAGATCGAGCTACAACTTAGTAACCTCTGCAATGGCGCCTTCTCCAGAAGCCTTTCCGGTCAGTATTGTATAATCATTACTTACATTTGA 600 46.5 MEEMYGLQSTAEYSDKALMSPENLILPPDYQSLLVSSGEFRDRIPVFGSNELLSAAASVISEAEAASITMEIQCEEDMVNVIKAKISSHPTYPRLLDAYIDCQKVGAPPAISHLLEGIRQESDICNRHAVTTCLGVDPELDEFMETYCDMLVKYKSDLKRPFDEATTFLNKIELQLSNLCNGAFSRSLSGQYCIIITYI 199
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
18 8364211 8366136 - Carg14481-RA Car18g00717 166419
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car18g00717 199 Pfam KNOX2 domain 134 180 IPR005541 GO:0003677|GO:0005634
Car18g00717 199 Pfam KNOX1 domain 82 123 IPR005540 GO:0003677|GO:0005634
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car05g00025 Car18g00717 CCT
Car04g01779 Car18g00717 CCT
Car04g01779 Car18g00717 ECH
Car05g00025 Car18g00717 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car18g00717 Car-Chr18:8364211 Car11g00082 Car-Chr11:440410 7.18E-47 dispersed
Car18g00717 Car-Chr18:8364211 Car04g01779 Car-Chr4:10166478 1.11E-118 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car18g00717 - - csv:101211876 350.132