Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Car18g00741 | ATGTCAAATTCTGAAACTGCCGACAGCTCTAATGGCGCCGCCATCGACACCCACAAAAACCAGCCCTCTTCCAACGGAGCCCTCGCCGTTAAAAAGCCCCCTTCCAAGGACCGCCACAGCAAGGTGGACGGCCGTGGCCGTCGCATCCGTATGCCCATAATCTGCGCCGCTCGTGTCTTCCAGCTGACTCGTGAACTTGGTCATAAATCCGATGGCCAAACCATCGAGTGGCTCCTTCGTCAAGCAGAGCCTTCTATTATAGCTGCCACCGGCACCGGCACCACTCCCGCTAATTTCTCTTCCATCTCTCTCTCCGTCAGAGGAAATGCCAGCTCCGCCTCTCTCTCTTCCACTACTTCCACTCTCTCCCTCTCTCGCCCCCAGCCGTTCATTCTCGGGAAGCGTGTCAGAGCCGACGACGACGGCGGTACTGACGATGGGTTGGGAGTGGGTCCGAGTGGGTACTGGGCGATTCCGGCCAGACCGGATTACGGGCAGGTGTGGAGTTTCGCGGCTGCCGCCGCCGCGGAACAGGGGATTTCTCAGCCGGCGTCGTTGTTTGCTCAACAGCAACAGCCGATTAGAGAAGCATCGGCAGCAAGAGTTGGGAATTACCTTCCGGGTCATCTGAATTTACTGGCGTCCTTGTCCGGTGGCGGCGGTGCCGGCCGGCGGGAAGACGACCGTCGTTGA | 693 | 59.31 | MSNSETADSSNGAAIDTHKNQPSSNGALAVKKPPSKDRHSKVDGRGRRIRMPIICAARVFQLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPANFSSISLSVRGNASSASLSSTTSTLSLSRPQPFILGKRVRADDDGGTDDGLGVGPSGYWAIPARPDYGQVWSFAAAAAAEQGISQPASLFAQQQQPIREASAARVGNYLPGHLNLLASLSGGGGAGRREDDRR | 230 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
18 | 8490719 | 8491411 | + | Carg14457-RA | Car18g00741 | 166443 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Car18g00741 | 230 | MobiDBLite | consensus disorder prediction | 32 | 47 | - | - | |
Car18g00741 | 230 | MobiDBLite | consensus disorder prediction | 1 | 28 | - | - | |
Car18g00741 | 230 | Pfam | TCP family transcription factor | 35 | 123 | IPR017887 | - | |
Car18g00741 | 230 | MobiDBLite | consensus disorder prediction | 1 | 47 | - | - | |
Car18g00741 | 230 | ProSiteProfiles | TCP domain profile. | 35 | 89 | IPR017887 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Car04g02171 | Car-Chr4:17624847 | Car18g00741 | Car-Chr18:8490719 | 6.13E-80 | dispersed | |
Car15g00738 | Car-Chr15:4134034 | Car18g00741 | Car-Chr18:8490719 | 7.70E-84 | dispersed | |
Car18g00741 | Car-Chr18:8490719 | Car13g00957 | Car-Chr13:9659431 | 8.21E-42 | dispersed | |
Car18g00741 | Car-Chr18:8490719 | Car04g01351 | Car-Chr4:7823374 | 2.90E-112 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
5178 | PF03634 | TCP | 1.30E-33 | No_clan | Car | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Car18g00741 | K16221 | - | csv:101206050 | 315.849 |