Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car18g00741 ATGTCAAATTCTGAAACTGCCGACAGCTCTAATGGCGCCGCCATCGACACCCACAAAAACCAGCCCTCTTCCAACGGAGCCCTCGCCGTTAAAAAGCCCCCTTCCAAGGACCGCCACAGCAAGGTGGACGGCCGTGGCCGTCGCATCCGTATGCCCATAATCTGCGCCGCTCGTGTCTTCCAGCTGACTCGTGAACTTGGTCATAAATCCGATGGCCAAACCATCGAGTGGCTCCTTCGTCAAGCAGAGCCTTCTATTATAGCTGCCACCGGCACCGGCACCACTCCCGCTAATTTCTCTTCCATCTCTCTCTCCGTCAGAGGAAATGCCAGCTCCGCCTCTCTCTCTTCCACTACTTCCACTCTCTCCCTCTCTCGCCCCCAGCCGTTCATTCTCGGGAAGCGTGTCAGAGCCGACGACGACGGCGGTACTGACGATGGGTTGGGAGTGGGTCCGAGTGGGTACTGGGCGATTCCGGCCAGACCGGATTACGGGCAGGTGTGGAGTTTCGCGGCTGCCGCCGCCGCGGAACAGGGGATTTCTCAGCCGGCGTCGTTGTTTGCTCAACAGCAACAGCCGATTAGAGAAGCATCGGCAGCAAGAGTTGGGAATTACCTTCCGGGTCATCTGAATTTACTGGCGTCCTTGTCCGGTGGCGGCGGTGCCGGCCGGCGGGAAGACGACCGTCGTTGA 693 59.31 MSNSETADSSNGAAIDTHKNQPSSNGALAVKKPPSKDRHSKVDGRGRRIRMPIICAARVFQLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPANFSSISLSVRGNASSASLSSTTSTLSLSRPQPFILGKRVRADDDGGTDDGLGVGPSGYWAIPARPDYGQVWSFAAAAAAEQGISQPASLFAQQQQPIREASAARVGNYLPGHLNLLASLSGGGGAGRREDDRR 230
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
18 8490719 8491411 + Carg14457-RA Car18g00741 166443
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car18g00741 230 MobiDBLite consensus disorder prediction 32 47 - -
Car18g00741 230 MobiDBLite consensus disorder prediction 1 28 - -
Car18g00741 230 Pfam TCP family transcription factor 35 123 IPR017887 -
Car18g00741 230 MobiDBLite consensus disorder prediction 1 47 - -
Car18g00741 230 ProSiteProfiles TCP domain profile. 35 89 IPR017887 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car04g02171 Car-Chr4:17624847 Car18g00741 Car-Chr18:8490719 6.13E-80 dispersed
Car15g00738 Car-Chr15:4134034 Car18g00741 Car-Chr18:8490719 7.70E-84 dispersed
Car18g00741 Car-Chr18:8490719 Car13g00957 Car-Chr13:9659431 8.21E-42 dispersed
Car18g00741 Car-Chr18:8490719 Car04g01351 Car-Chr4:7823374 2.90E-112 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
5178 PF03634 TCP 1.30E-33 No_clan Car TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car18g00741 K16221 - csv:101206050 315.849