Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car18g00783 ATGGCGTTCGATGTGGAATACGCCCGTTGGTTGGAAGACCAAAACAAGCAGATCAATGAACTGAGAGCAGCCGTAAACTCTCATGCAAGCGATACCGAACTTCGAATGGTTGTCGATGGCATCTTGCTTCACTACGACGAGTTTTTTCAGTTAAAAAGCGTCGCTGCAAAGGCTGATGTTTTTCACTTATTGTCTGGCATGTGGAAAACACCAGCTGAAAGATGTTTTTTGTGGCTTGGTGGTTTCCGTTCATCAGAGCTCCTAAAGCTTCTTGTAAATCAATTAGAGCCGCTCACAGAACAGCAATTGTTGGGCATATCAAACTTGCAGCAGTCTTCACAACAAACTGAAGATGCATTGTCACAAGGCATGGAAGCGTTGCAGCAATCATTGGCTGAGACATTGTCCAGTGGATCACTTGGCTCTTCGAATGCGTCTGGCAATAAAACAATTCTATTCCTCCAAAAGAATGTATAA 477 43.82 MAFDVEYARWLEDQNKQINELRAAVNSHASDTELRMVVDGILLHYDEFFQLKSVAAKADVFHLLSGMWKTPAERCFLWLGGFRSSELLKLLVNQLEPLTEQQLLGISNLQQSSQQTEDALSQGMEALQQSLAETLSSGSLGSSNASGNKTILFLQKNV 158
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
18 8834948 8836901 - Carg14415-RA Car18g00783 166485
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car18g00783 158 Pfam Seed dormancy control 17 92 IPR025422 GO:0006351|GO:0043565
Car18g00783 158 Coils Coil 11 31 - -
Car18g00783 158 ProSiteProfiles DOG1 domain profile. 1 158 IPR025422 GO:0006351|GO:0043565
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car18g00783 Car-Chr18:8834948 Car12g00121 Car-Chr12:640069 8.99E-87 dispersed
Car18g00783 Car-Chr18:8834948 Car04g01398 Car-Chr4:8104388 1.69E-89 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car18g00783 K14431 - csv:101216885 265.003