Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car18g00804 ATGGCAGGAATGTTTAACGGGGAGGGGTCGTCGTCAGTAACTTCATCGCCGTTGCAGCTCTTTCCGTGGTCGTTATCGCCTGGTATAGGATCGCCATACCCTTTTCTAAGGGAGCTCAAATCTGAAGAGAGGGGCTTATGTCTGATTCACCTCCTTCTTGCCTGTGCCAACCAAGTTGCCATTGGTAACATCGAAAATGCCAACGTTGGCCTCGAGCAAATTTCCCACCTAGCTTCGCCCGACGGGGACACAATGCAGCGGATTGCTGCCTACTTCACCGAGGCACTCGCCGATCGGATACTCAAGTCATGGCCAGGCTTACACAAAGCCTTGAACTCGACCAAAATATTGTCGGTCCCGGAAGAGATTCTCGCTCAGAGATTGTTCTTTGAGCTATGTCCTTTCTTGAAGCTTGCATATGTGATAACTAATCAGGCTATCATAGAAGCTATGGAGGGAGAAAGGATGATTCATATTATTGATTTCAAATCATGTGAGCCTGCTCAATGGATAAACCTTCTTCAGACATTGAAAGACCGACCAGACGGTCCGCCCCACGTGAGAATAACCGGAATTCACGAACAGAAGGAGGTGTTGGAACAAATGGCTGTTCGGCTAACCGAAGAGGCCGAAAAATGGGACATACCATTTCAGTTCACCCCAGTTGTTAGCAAGTTAGAGAATCTCGACCTTGAAAGTTTAAGGGTGAAGACAGGAGAAGCACTCGCAGTGAGCTCAGTACTCGAACTTCACACGATTTTAGCCACGGACGACGATAAGACAAAAACATCGCCATCTGCATCGAAGAACTTGCAAAAGCTCCTACGTATGAAGCAGCGAACACTCGGAGAGTGGCTGGAAACAGATTCGTTGCAAGTTTTTAGTAGTAGCCCGGATTCAGCGTCGGTATGTTCGCCATCAGGATTGAATCCTTCACAAAAGATGAATAGTTTTTTGAATGCACTGTGGGGGCTATCTCCAAAAGTGATGGTAATAACAGAGCAAGAATCAAACCTGAATGGATCAGGGTTGATGGAGAGAGTACTAGAAGCACTAAACTTCTATGCTGCATTGTTTGATTGCTTGGAATCAACGGTGTCGAGGTCGTCGATCGAGCGACAAAGGGTGGAGAAGATGCTTTTAGGAGAGGAAATAAAGAACATCATTGCTTGCGAGGGAGCGGAGAGAAGGGAGAGACACGAAAAGCTCGAGAAATGGATAGTACGATTCGAAAGCGTGGGGTTCGGGAGGGTTGGATTGAGTTATAATAGTATGTTTCTGGGGAATAGATTGTTGCACAGCAATGGATATGATGGTTATAAAATCAAAGAAGAGAATGGATTTTTGTTCATTTGTTGGCAAGATAGGCCACTTTTTTCTGTATCAGCTTGGGGGTTTCAAAGGCAAAGCTGA 1413 46.07 MAGMFNGEGSSSVTSSPLQLFPWSLSPGIGSPYPFLRELKSEERGLCLIHLLLACANQVAIGNIENANVGLEQISHLASPDGDTMQRIAAYFTEALADRILKSWPGLHKALNSTKILSVPEEILAQRLFFELCPFLKLAYVITNQAIIEAMEGERMIHIIDFKSCEPAQWINLLQTLKDRPDGPPHVRITGIHEQKEVLEQMAVRLTEEAEKWDIPFQFTPVVSKLENLDLESLRVKTGEALAVSSVLELHTILATDDDKTKTSPSASKNLQKLLRMKQRTLGEWLETDSLQVFSSSPDSASVCSPSGLNPSQKMNSFLNALWGLSPKVMVITEQESNLNGSGLMERVLEALNFYAALFDCLESTVSRSSIERQRVEKMLLGEEIKNIIACEGAERRERHEKLEKWIVRFESVGFGRVGLSYNSMFLGNRLLHSNGYDGYKIKEENGFLFICWQDRPLFSVSAWGFQRQS 470
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
18 9120096 9121508 - Carg20683-RA Car18g00804 166506
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car18g00804 470 ProSiteProfiles GRAS family profile. 39 465 IPR005202 -
Car18g00804 470 Pfam GRAS domain family 48 464 IPR005202 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car10g00825 Car-Chr10:4678782 Car18g00804 Car-Chr18:9120096 0 dispersed
Car18g00804 Car-Chr18:9120096 Car04g02872 Car-Chr4:21709645 1.11E-73 dispersed
Car18g00804 Car-Chr18:9120096 Car11g00741 Car-Chr11:4314453 0 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
5186 PF03514 GRAS 9.50E-135 CL0063 Car TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car18g00804 - - cmo:103489486 877.856