Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car18g00808 ATGGGGAAGAAAGGGGGTTGGTTTGCTGCAGTGAGGAAGGTTCTCAGTAACAAGATACAAGAAAGATCCAAGAAAAAATGGTTCCAAAGGGAGGAGAGTGTGGACACATTTGTGGAACCATCCCTGTTAGATGTTCCCGCAGAACCTTCTCCTATGGAAGATGATATCAATCAAACTAAGCCGGAGGATGAACTGAGCGAGCTTCCGCATTCCGAGGCGGTGGAGCCTGCTGTTGATGAAGCTCAGCTGGCTGTGGAGGATGAACATCTACCCAGTATTATACCCTGTAAGCCAGAAATGACTGAGGAAACAGGAGCTATTATTATTCAATCAGCCTTTCGTGGATATAAGGCGAGGAAAGTATCAAGGGGTCTCAAAGCGATAATGAGATTGAGGTCGTTGGTACAAGGCCACTCTGTGAAACGGCAGGTGGCCTCTACTTTAAAAAGTATGCAAACTCTTGCACATGTACAGTCAGAGGTTCGTGCAAGGAGAGTAAGAATGTCTGAAGAAAATCAGGATTTCCAGCGGCAACTTTGTAACAAACGTGAGAAAGATCACGAGAAGTTCAAAACTTCTCGAACATGGAAGAGTTCTTCAAAAACTACAACCCATTCTGTCATGGATTCAAACAATCCCTACTGGGGCTGGAGTTGGTTGGAGAGATGGATGGCAGCTCGCCCATGGGAACTCCAAAGCACAGCCGATCACCCAGATCACAATTCTGTCACAAACGTCCCAACTCATGCATCTACAATCGACATAATCCAAGTTTATGCTCGTCGCGATCCGAACTCCCATACGAAGCCTTCTCCAAGGACTCCTACTAGCCAAAAGCCAAGCCAAGTGCATAGGCATCAGTCACCTTCCATTCCTAGAGCATTATCTTCATCATCTAGCAAAAAGAAAACAAATGCAGCCAACTTAAAGGTAGGCAGCTGGAGTGGGGATGATGACATGAGAAGCCCCGTGAGTGTCGACTCAAAGCTCACCCGGAGGCATAGTATAGGAGGGTCATCATTCAGGGATGACATAAGCATTGCCAGTTTACATTCAGTTTCGAGTTACACGCCAACGTCGAAGACAGCTGCTAAGGCTCGGTCCCGGTTGGCAAGTCCATCTGTGACACTGAAGAAAGAGGCAATGGAAAAAGGATCTGCAAGCACAGGTTCTGCAAAGAAGCGGCTCTCCATTACAGGTTCCCCTGCTAAACCAAGGAGGCTATCAAGTCCTCCCATTGTGAATAGTAGCCAAGCTACACCATTCCTCGCAGGCCTAGCGGTAGCTGCTGCGGCTCTTGCTGGTAGATATGGAATTCGAGCTTGGCAAGCATTCAAGACACGGCCACCACAAGCCAGATCACGCAAATTCTATGAAGGTGGTTTCAATCCTACAATGACAAAGAGGGAAGCAGCTCTTATTCTTGGTGTT 1431 47.38 MGKKGGWFAAVRKVLSNKIQERSKKKWFQREESVDTFVEPSLLDVPAEPSPMEDDINQTKPEDELSELPHSEAVEPAVDEAQLAVEDEHLPSIIPCKPEMTEETGAIIIQSAFRGYKARKVSRGLKAIMRLRSLVQGHSVKRQVASTLKSMQTLAHVQSEVRARRVRMSEENQDFQRQLCNKREKDHEKFKTSRTWKSSSKTTTHSVMDSNNPYWGWSWLERWMAARPWELQSTADHPDHNSVTNVPTHASTIDIIQVYARRDPNSHTKPSPRTPTSQKPSQVHRHQSPSIPRALSSSSSKKKTNAANLKVGSWSGDDDMRSPVSVDSKLTRRHSIGGSSFRDDISIASLHSVSSYTPTSKTAAKARSRLASPSVTLKKEAMEKGSASTGSAKKRLSITGSPAKPRRLSSPPIVNSSQATPFLAGLAVAAAALAGRYGIRAWQAFKTRPPQARSRKFYEGGFNPTMTKREAALILGV 477
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
18 9145038 9151773 - Carg20687-RA Car18g00808 166510
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car18g00808 477 MobiDBLite consensus disorder prediction 379 413 - -
Car18g00808 477 MobiDBLite consensus disorder prediction 269 311 - -
Car18g00808 477 MobiDBLite consensus disorder prediction 39 69 - -
Car18g00808 477 Pfam IQ calmodulin-binding motif 106 120 IPR000048 GO:0005515
Car18g00808 477 MobiDBLite consensus disorder prediction 182 207 - -
Car18g00808 477 MobiDBLite consensus disorder prediction 55 69 - -
Car18g00808 477 MobiDBLite consensus disorder prediction 263 338 - -
Car18g00808 477 ProSiteProfiles IQ motif profile. 102 130 IPR000048 GO:0005515
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car04g02506 Car18g00808 CCT
Car15g00406 Car18g00808 CCT
Car04g02506 Car18g00808 ECH
Car15g00406 Car18g00808 ECH
Car04g01432 Car18g00808 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car15g00406 Car-Chr15:2112389 Car18g00808 Car-Chr18:9145038 1.33E-102 dispersed
Car18g00808 Car-Chr18:9145038 Car09g00291 Car-Chr9:1565094 2.20E-24 dispersed
Car03g01127 Car-Chr3:9098742 Car18g00808 Car-Chr18:9145038 1.62E-20 transposed
Car18g00808 Car-Chr18:9145038 Car04g01432 Car-Chr4:8297663 1.50E-115 wgd
Car18g00808 Car-Chr18:9145038 Car04g02506 Car-Chr4:19885272 4.21E-71 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car18g00808 - - cmax:111466344 735.717