Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car18g00831 ATGTTTCCTGTTCTTAGCATTCTCTTGATATGGATGTCTGGTTTGTTCTTTCTTGTCGCCTCGGCTTCTTTCAATCTCACATTGCCCCACCAGCATCCTGACCCTGATTCTGTTGCTGATGAACTTCAAAGGACAGTCAATGCATCGATATCGAGAAGAAAAGCGCTATCCATCGAATCAAAGGATCAAGCCTTCTCTTGCCTCACCGGAAACCCCATAGACGATTGCTGGCGTTGCGACCCGAATTGGGCGGCGAACCGGCAGAGACTCGCTGACTGCGGCATCGGGTTCGGCCGCGACGCCATGGGTGGCAAAGGCGGCAAGATCTACATCGTCACCGACTCCTCAGATTCCAACCCGGAAAACCCAACTCCGGGAACCCTCCGCCACGCCGTGATCCAATTCGAACCACTCTGGATCATCTTCTCCGCCGACATGACAATCAAACTCAAATATGAACTTATCATCAACAGCTTCAAAACGATCGACGGCCGCGGCGCCAACGTCCACATCACCGGCGGTGGTTGTATCACTATCCAATACGTGTCCAACATCATCATCCACAACATCCACGTGCATCACTGTGTACCCTCTGGCAATGCCAACATAAGGTCAACCCCGACCCACGTCGGGCACCGAGGGTTATCAGACGGGGACGGGATCTCAATATTCAGCTCAAGAAAGATTTGGATAGACCATTGCTCGCTTTCATACTGCACCGACGGGCTAATAGACGCAATAATGGGATCGACAGGGATAACAATATCGAACAGCTATTTTTCGCACCACGACGAGGTGATGCTGCTGGGACACGACGACCGGTACGTGCAGGACTCGGGTATGCAAGTGACCATAGCGTTCAACCACTTCGGTGAGGCTCTGGTGCAGCGCATGCCCAGGTGCAGACATGGCTACATTCATGTGGTCAACAATGACTTCACGGCTTGGGAAATGTACGCCATTGGCGGCAGTGCTCGCCCCACTATTAACAGCCAGGGTAACCGTTATGTGGCTCCTGTCAACCCCAATGCCAAAGAGGTGACGAGACGTTTAGATGCGGCGGAGACGGAATGGACGGCGTGGAATTGGCGGACGGACGGCGATATTTTGGTGAACGGCGCGTTTTTTGTGCCGTCCGGTGCCGGACTTAGCACCCAGTACGGTAAAGCCTCCAGTACTGAGCCTAAGTCGGTGGCTCTTATCAATCAGCTCACTATGAACGCTGGCGTTTTGGGTGCCCCAAGGTATAGTAATGGTGAAGGGATTGTATATCCAGGATTTAGCGGCAGCACTGGCGGCGGTAATGGCGGATATGGCGGCGGCACTGTCATTAATAATAGCCCGATGTATGGAAATAGCGGTGGTGGTGAGGATGACTTTTACGGAATGATATTTAAAGGCGGCGGTAACAGAGTATCGCCGCCGTGGTCGCCGCCGATGATCTTATGTGTTCAAATTTTAGTAGTTTTGTATATAGTAACAAATAATAACGGTTTATTGACGTTATAG 1509 51.69 MFPVLSILLIWMSGLFFLVASASFNLTLPHQHPDPDSVADELQRTVNASISRRKALSIESKDQAFSCLTGNPIDDCWRCDPNWAANRQRLADCGIGFGRDAMGGKGGKIYIVTDSSDSNPENPTPGTLRHAVIQFEPLWIIFSADMTIKLKYELIINSFKTIDGRGANVHITGGGCITIQYVSNIIIHNIHVHHCVPSGNANIRSTPTHVGHRGLSDGDGISIFSSRKIWIDHCSLSYCTDGLIDAIMGSTGITISNSYFSHHDEVMLLGHDDRYVQDSGMQVTIAFNHFGEALVQRMPRCRHGYIHVVNNDFTAWEMYAIGGSARPTINSQGNRYVAPVNPNAKEVTRRLDAAETEWTAWNWRTDGDILVNGAFFVPSGAGLSTQYGKASSTEPKSVALINQLTMNAGVLGAPRYSNGEGIVYPGFSGSTGGGNGGYGGGTVINNSPMYGNSGGGEDDFYGMIFKGGGNRVSPPWSPPMILCVQILVVLYIVTNNNGLLTL 502
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
18 9330760 9335657 - Carg20712-RA Car18g00831 166533
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car18g00831 502 Pfam Pectate lyase 153 333 IPR002022 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car15g00460 Car18g00831 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car15g00460 Car-Chr15:2447824 Car18g00831 Car-Chr18:9330760 0 dispersed
Car18g00831 Car-Chr18:9330760 Car08g00910 Car-Chr8:6115148 0 dispersed
Car18g00831 Car-Chr18:9330760 Car04g01467 Car-Chr4:8499852 0 wgd
Car18g00831 Car-Chr18:9330760 Car04g02458 Car-Chr4:19559525 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car18g00831 K01728 - csv:101205739 872.078