Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car18g00847 ATGTTGGCAATGGAGAAGGATTTTGATGCTAAGTTGATGATTCAGAAACAGGGGAACGCTTCTAATGGCGGCGGCAATGTTCAGAGATCCAATAGCTTTGCGTTTCGTGCTCCTCAGGAGAATTTTACTATACAGGATTTTGAATTGGGGAAGATTTATGGCGTTGGTTCATATTCCAAGGTTGTGAGGGCGAAGAAGAAGGACACAGGAATTGTGTATGCATTGAAGATAATGGACAAGAAATTCATTACCAAAGAAAACAAAACTGCTTATGTGAAGTTGGAAAGGATTGTACTTGATCAATTGGACCATCCTGGTGTTGTCAGGCTATTTTTTACCTTTCAGGATACTTTTTCTTTGTACATGGCATTGGAGTCGTGTGAAGGTGGAGAGCTTTTTGATCAGATAAATAGGCCTGAGAACTTGCTGCTTACTACTGATGGACATATCAAAATAGCCGATTTCGGGAGCGTAAAGCCTATGGTCGACAGTCGAATCACCGTGCTTCCGAATGCAGCATCGGATGACAAAGCTTGTACATTTGTGGGCACTGCTGCATATGTTCCTCCAGAAGTTCTTAATTCCTCCCCTGCAACTTTCGGAAACGACCTTTGGGCGCTCGGGTGCACCGTGTACCAAATGCTTTCAGGGACTTCTCCTTTTAAGGATGCAAGTGAGTGGCTTATTTTTCAAAAAATTGTAGCTCGAGATATAAAATTCCCCAGTTATTTTTCCGAGCAAGCCCGGGATCTCATCGACCACCTATTGGATTTAGATCCCGTTAAGAGACCGGGCGCCGGAGCTGAGGGCTATGCTTCTCTTAAGAGTCATCCATTCTTTGAGGGGGTTGATTGGAAGAACATAAGAACACAAACTCCTCCCAGACTTGCTTTAGAAGCAGTGTCTCGCTCGAACGAGAACGACGACAGCTCCGAGTCCTCTTGGAATCCTTCGCATATCGGAGACGGTGCACCAAGACAAAACGACGGGAATGCTGGTTCTGCATCGACTTCTGAAGGATCGAATCATATTGCTCGGATTGCATCGATAGACTCCTTCGATTCGAAATGGCAACAATTTCTTGAACCTGGAGAATCTGTTCTTATGATATCAATGGTGAAAAAGATTCAGAAAATCACAAGCAAAAAGGTTCAGCTTATCCTCACAAACAAACCAAAGTTGATTTATGTTGATCCTTCAAAGCTCATTGTTAAGGGGAATATCATTTGGTCTGACAATCCTAATGACCTCAACATTCAAGTGATTAGTCCTTCACATTTCAAGATTTGTACGCCGAAAAAGATTGCTTCGTTCGAGGACGCGAAACAACGAGCATGGCAATGGAAGAAGGCGATCGAGGGGCTTCAGAATCGGTGA 1377 43.72 MLAMEKDFDAKLMIQKQGNASNGGGNVQRSNSFAFRAPQENFTIQDFELGKIYGVGSYSKVVRAKKKDTGIVYALKIMDKKFITKENKTAYVKLERIVLDQLDHPGVVRLFFTFQDTFSLYMALESCEGGELFDQINRPENLLLTTDGHIKIADFGSVKPMVDSRITVLPNAASDDKACTFVGTAAYVPPEVLNSSPATFGNDLWALGCTVYQMLSGTSPFKDASEWLIFQKIVARDIKFPSYFSEQARDLIDHLLDLDPVKRPGAGAEGYASLKSHPFFEGVDWKNIRTQTPPRLALEAVSRSNENDDSSESSWNPSHIGDGAPRQNDGNAGSASTSEGSNHIARIASIDSFDSKWQQFLEPGESVLMISMVKKIQKITSKKVQLILTNKPKLIYVDPSKLIVKGNIIWSDNPNDLNIQVISPSHFKICTPKKIASFEDAKQRAWQWKKAIEGLQNR 458
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
18 9459685 9465381 + Carg20728-RA Car18g00847 166549
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car18g00847 458 Coils Coil 438 458 - -
Car18g00847 458 MobiDBLite consensus disorder prediction 299 340 - -
Car18g00847 458 Pfam Protein kinase domain 49 137 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car18g00847 458 Pfam Protein kinase domain 139 280 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car18g00847 458 MobiDBLite consensus disorder prediction 303 321 - -
Car18g00847 458 Pfam PH domain 355 457 IPR033931 -
Car18g00847 458 ProSiteProfiles Protein kinase domain profile. 47 280 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car04g01478 Car18g00847 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car18g00847 Car-Chr18:9459685 Car11g00123 Car-Chr11:688792 5.12E-41 dispersed
Car18g00847 Car-Chr18:9459685 Car04g01478 Car-Chr4:8586765 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
89532 PF00069 Pkinase 4.50E-26 CL0016 Car PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car18g00847 K06276 - csv:101212874 834.713