Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car18g00872 ATGAGGGTGCCTGCAACTCTGGGCGATGATTTTCTGCGAGAAAGAGCGGCAAAGATGAGAGAATCTCTGCAAAAGAGCCAAACTATTACTGATAATGTTGTTTCGATTCTCGGCTCATTTGACCACCGTCTTTCTGCTCTCGAAACCGCTATGCGCCCTACTCAGATCAGAACCAATTCTATTCGTAAAGCTCACGAGAACATTGATAAGACTTTGAAGGCTGCGGAGGTTATTTTAGCACAGTTTGATCTCTCTCGCCAGGCAGAAATGAAAATTCTCAAAGGGCCTCATGAGGATTTGGAGAGTTATCTCGGGTCAATCGGTCAGTTAAGAAACATTATTAAATTCTTTAGCAGCCAGAAAGGTTTTAAGAGTAGTGAGGTAGTGCTGAATCATGCAAATAATCTGCTTGCAAAAGCCATCTCAAAGCTTGAAGATGAGTTTAGGCAGCTATTATCTTCCTACAGCAAACCTGTGGAGCCTGAGCGCCTTTTCGATTGCCTGCCAAAATCGTTGCAACCATCTTCAGACTCTCCTGGTCATCATGACGATTCAAATGGAAAGAATCCCTCCTCAAATCACCATGCTGCACATCATGATAATAGCTTGGAGACTGCTGTCTTCACACCTCCCACTCTCATACCTCCTCGTGTTCTACCATTGCTACACGAGTTATCGCAGCAGATGGTTCAAGCTGGTCATCAACAGCAAATTCTAAAAGTCTATAGGGATACCCGTTCAGTCGTTTTGGAAGAAAGCCTTCGGAAATTGGGAGTTGAAAAACTTAGCAAAGAGGATGTCCAGAAGATGGCATGGGAGGTTTTAGAGGCCAAAATTGGGAACTGGATTCATTTTATGCGTATTGCAGTTAAACTACTGTTTGCTGGAGAACGACAAGTGTGCGATCAAATATTTGAAGGCTTCGAATCGCTTAGAGATCAATCCTTTGCCGAGGTTACAAGTAGTAGTGTGTCTGTGCTCTTCAGTTTTGGGGAGGCAATTGCTAAAAGCAAGAGGTCACCAGAAAAGTTGTTTGTACTTTTGGATATGTATGAAATAATGAGAGAGCTGCACTCAGAGATTGGGACAATTTTTAAGGGTGAAGCGTGCAATGAGATCAGGGAATCTGCATCGGGTTTGACCAAACGACTTGCACAGACAGCTAAGGATACATTCGGTGATTTTGAGGAAGCTGTTGAAAAAGATGCCACAAAAACTGCAGTGTTGGATGGAACAGTTCATCCTCTAACAAGCTATGTGATTAATTATGTCAAATTTCTTTTTGACTATCAGGCAACCTTGAAGCAGCTTTTCCAAGAATTTGCAGGTAGCGGTCAAACGAGTTCGGAATTGGCGTCTGTCACAATGCAAATAATGCAGGCCCTTCAATCTAATTTGGACGGAAAATCTAAGCATTACAGAGATCCTGCTTTGACTCACTTGTTCCTCATGAACAACATTCATTATATAGTTAGATCTGTCCGCAGATCTGAAGCCAAGGATTTACTTGGGGACGATTGGGTTCAGCGACATAGGAGGGTTGTACAACAACATGCAAATCAGTATAAAAGGAATGCTTGGTCAAAGATTCTGCAATGTCTTTCTGTTCAAGGCTTAACTTCCTCTGGAGGTGGCAGCATACCTGGTATAGATGGAGGAAACAGTAGCGGAGTTTCTAGGGCGCTTATTAAAGACAGGTTCAAGACTTTCAACATGCAATTTGAGGAACTGCATCAAAGACAATCTCAATGGGCAGTTCCGGATACCGAGTTGCGGGAGTCTCTAAGACTTTCAGTTGCTGAAGTCTTACTTCCTGCATACAGATCCTTCCTGAAGCGTTTCGGGCCACTTGTTGATGGTGGAAAGAATCCCCAAAAGTATGTTAGATACCAACCAGAGGATCTCGAGAGGATGCTCGGAGAATTTTTCGAAGGGAAGAACTTGAGCGAGCCTAAGCGGTAG 1962 43.37 MRVPATLGDDFLRERAAKMRESLQKSQTITDNVVSILGSFDHRLSALETAMRPTQIRTNSIRKAHENIDKTLKAAEVILAQFDLSRQAEMKILKGPHEDLESYLGSIGQLRNIIKFFSSQKGFKSSEVVLNHANNLLAKAISKLEDEFRQLLSSYSKPVEPERLFDCLPKSLQPSSDSPGHHDDSNGKNPSSNHHAAHHDNSLETAVFTPPTLIPPRVLPLLHELSQQMVQAGHQQQILKVYRDTRSVVLEESLRKLGVEKLSKEDVQKMAWEVLEAKIGNWIHFMRIAVKLLFAGERQVCDQIFEGFESLRDQSFAEVTSSSVSVLFSFGEAIAKSKRSPEKLFVLLDMYEIMRELHSEIGTIFKGEACNEIRESASGLTKRLAQTAKDTFGDFEEAVEKDATKTAVLDGTVHPLTSYVINYVKFLFDYQATLKQLFQEFAGSGQTSSELASVTMQIMQALQSNLDGKSKHYRDPALTHLFLMNNIHYIVRSVRRSEAKDLLGDDWVQRHRRVVQQHANQYKRNAWSKILQCLSVQGLTSSGGGSIPGIDGGNSSGVSRALIKDRFKTFNMQFEELHQRQSQWAVPDTELRESLRLSVAEVLLPAYRSFLKRFGPLVDGGKNPQKYVRYQPEDLERMLGEFFEGKNLSEPKR 653
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
18 9691630 9697983 - Carg18998-RA Car18g00872 166574
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car18g00872 653 MobiDBLite consensus disorder prediction 181 199 - -
Car18g00872 653 Pfam Exo70 exocyst complex subunit 281 640 IPR046364 GO:0000145|GO:0005546|GO:0006887
Car18g00872 653 MobiDBLite consensus disorder prediction 168 199 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car04g01504 Car18g00872 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car07g00813 Car-Chr7:4300203 Car18g00872 Car-Chr18:9691630 0 dispersed
Car18g00872 Car-Chr18:9691630 Car10g00053 Car-Chr10:236582 4.63E-116 dispersed
Car18g00872 Car-Chr18:9691630 Car04g01504 Car-Chr4:8745149 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car18g00872 K07195 - csv:101206262 1174.46