Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Car18g00888 | ATGAACTTGGCTGTTTGTGGGGATAGATTTGTAGCAATAGATGTGACATTTAGGAACACAGCAGGGCCAGAGAAGCACCAAGCAGTAGCACTAAGGAGCAGTGCAGATCTCTCAACATTCTACCGCTGCAGCTTCGAGGGCTATCAAGACACTCTCTACGTCCATTCCCTAAGACAATTCTACCGAGAATGCGACATTTACGGCACAGTAGATTTTATATTTGGCAATGCTGCTGCAGTTTTCCAAAAATGCAATCTATACGCCAGAAAGCCACTCCCAAACCAAAAGATCGCCATCACAGCACAGGGCCGAACCGATCCGAACCAAAACACCGGTATCTCGATCCATGACTGCACGATCAAGGCAGCCCCCGACTGGGAGACGGATTACTCAAACTCGACGACGACAAACTATCTTGGACGGCCATGGAAGCAGTACTCAAGAACAGTGTATATGCAGTGTTACATTGGGGATTTGATCAGCCCTGTGGGGTGGTTGGAGTGGAATGGAACAGCAGGGTTGGACACTTTGTATTATGGGGAGTTTGAGAATTATGGGCCAGGAGCTAACACAAGCTTGAGGGTGGATTGGCCTGGCTATAGCTTGATGAATATTACTCAAGCTATGAACTTTACTGTCTATAATCTTACTATGGGAGATACATGGCTGCCTTACACTGATATTCCCTTCTCTGGTGGTTTGGTCTAA | 708 | 46.89 | MNLAVCGDRFVAIDVTFRNTAGPEKHQAVALRSSADLSTFYRCSFEGYQDTLYVHSLRQFYRECDIYGTVDFIFGNAAAVFQKCNLYARKPLPNQKIAITAQGRTDPNQNTGISIHDCTIKAAPDWETDYSNSTTTNYLGRPWKQYSRTVYMQCYIGDLISPVGWLEWNGTAGLDTLYYGEFENYGPGANTSLRVDWPGYSLMNITQAMNFTVYNLTMGDTWLPYTDIPFSGGLV | 235 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
18 | 9777797 | 9778748 | - | Carg19014-RA | Car18g00888 | 166590 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Car18g00888 | 235 | Pfam | Pectinesterase | 3 | 219 | IPR000070 | GO:0030599|GO:0042545 | |
Car18g00888 | 235 | ProSitePatterns | Pectinesterase signature 2. | 66 | 75 | IPR033131 | - |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Car04g01516 | Car18g00888 | CST |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Car18g00888 | Car-Chr18:9777797 | Car17g01015 | Car-Chr17:8052657 | 1.76E-106 | dispersed | |
Car15g00913 | Car-Chr15:5737801 | Car18g00888 | Car-Chr18:9777797 | 2.35E-99 | wgd | |
Car18g00888 | Car-Chr18:9777797 | Car04g01516 | Car-Chr4:8807358 | 9.42E-147 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Car18g00888 | K01051 | - | csv:101206112 | 452.981 |