Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car18g00924 ATGGAATTTCATATGGGGTTGTTCTGTTCTTTCATTTTGTCCTTTGTTCTTTCTCATCTAGTAGCACATCCTTTGGCTCGGAATGATACTAGTTTCGTTCGTCCAGATTGCCCGCCCTTCGATTGTGGAAATTTTGGCTTCTTAGGATTCCCTTTTAACAACGAAACGCTTACTGATTGCGGATTATACACAGTTAGAAACTGCTCAGGAGAGCCAAAAATCCAGCTGAAACGTGAACGAGATGTATGGTTCGATGTTGTTAGCATATCTCAGGCTAATGTCATCCATATCAATGACACGGAACTTCAAAAGCAAATAAACTCTCGCAATTGTTCAATTCTGGACGATCTGTCTCTTCCGACGTCTCCTTCATCTTCTTTATCCACAAACAATAATATTACTTTATACAATTGCACAGATAATCCTGGAGGTGCTTTTCCTCTTTTCATCAGTAAATTTAGCTGCCCTGGTATTTATTCAGTCCTCAACTCTGGTACTCCTCCAAACTGTTCCACTTCCAATTCTAGATTTTTAGTTCCAGCTCTCCCGGTTGGTCCCAATAATTCTGTTCTTGAGTTTACTGCTGATTTCCAACTGCGAGTGACCGTATCTAGTATATGTTATGACTGTTTCCGTGAAGGAGGCCAATGCTCGATTACCAATGAAAAATTTGTGTGTAAGGATGGAAAACTAGAAGCAAGCCAAGATAAAAGTAGAATGAGCTTGTGGATAGGACTAGGTGTTGGAGTCCTAGGTGTAAATCTGCTTATGCTATTATTTGCTCTTTGGTACTGCAAAAAAAGGCGTGCTGCTCCAACAATGCTAACAAGGAATATATCTTGTGAACCCTACTCAAAATTCGACCTGGAAGATGGTGGCGTGTGCTTTGAAGTTCCTGTTTTCTCATATGGCGAACTGGAAATGGCCACTAACAAATTTGATCGTGATAAAGAACTTGGAGATGGTGGTTTTGGAACCGTATACCATGGGAAACTCCTTGATGGCCGGGAAGTTGCCGTGAAGCGCCTATATCAACATAACTATAGACGAGTAGAGCAATTCATGAATGAGGTTAAAATTCTCACCCGCCTTCGCCATAAAAATCTGGTCTCCCTTTATGGATGCACTTCAAAACGCAGTCGTGAACTTCTTCTTGTTTATGAATTTGTCGCAAATGGTACTGTTGCTGATCATCTTCATGGCGAACAAGCAAGTTTTAGCTTGCTCACATGGCCTATCCGGATGTCCATCGCTATTGAAACAGCAAGTGCTCTAGTTTATCTCCACGCTTCTGAAATCATTCATCGTGATGTGAAGACTACTAACATTCTCTTGGACAGTAATTTTTCCGTCAAAGTCGCTGATTTTGGTCTCTCTAGACTATTCCCAAACGACGTTAGTCATGTCTCGACTGCTCCTCAAGGCACCCCTGGTTACGTTGATCCTGAGTATTATCAGTGTTATCAGCTTACAACCAAGAGCGATGTTTATAGTTTTGGTGTCGTCTTAATCGAGCTTATATCGTCAATGCCAGCTGTTGATATAACAAGGCATCGGCACGAGATTAATTTGTCTAACTTAGCCGTGGACAAAATTTTAAGACAGGAAATTGATGAGCTGATTGATCCATGCCTCGGGTATCAATCAGACGAAAAGGTTCGACGCATGATATTGGCAGTGGCTTGGCTAGCTTTTCTATGTCTGCAGCAAGACAAGGAAAGGAGACCAACAATGGAAGAAGCGCTGGAAACTTTAAAGAGGATTGAGAGTGGGGAAGAAAGCGAGAATTTGCAGGATAATAGTGCACTGTCGAAGAGCTATGATCCAGCTCCTTCTCCAGAGTATGATGAAGTTGAATTGTTGAAGAATAAGAGGCAGCAGCTGTTGTCCCCTACTTCTGTTGCTGATAAATGGATCAGCTCAACCTCATTTGTTAGTGCTTCTACTTCTCTATCATCTATTTCCTAA 1968 41.67 MEFHMGLFCSFILSFVLSHLVAHPLARNDTSFVRPDCPPFDCGNFGFLGFPFNNETLTDCGLYTVRNCSGEPKIQLKRERDVWFDVVSISQANVIHINDTELQKQINSRNCSILDDLSLPTSPSSSLSTNNNITLYNCTDNPGGAFPLFISKFSCPGIYSVLNSGTPPNCSTSNSRFLVPALPVGPNNSVLEFTADFQLRVTVSSICYDCFREGGQCSITNEKFVCKDGKLEASQDKSRMSLWIGLGVGVLGVNLLMLLFALWYCKKRRAAPTMLTRNISCEPYSKFDLEDGGVCFEVPVFSYGELEMATNKFDRDKELGDGGFGTVYHGKLLDGREVAVKRLYQHNYRRVEQFMNEVKILTRLRHKNLVSLYGCTSKRSRELLLVYEFVANGTVADHLHGEQASFSLLTWPIRMSIAIETASALVYLHASEIIHRDVKTTNILLDSNFSVKVADFGLSRLFPNDVSHVSTAPQGTPGYVDPEYYQCYQLTTKSDVYSFGVVLIELISSMPAVDITRHRHEINLSNLAVDKILRQEIDELIDPCLGYQSDEKVRRMILAVAWLAFLCLQQDKERRPTMEEALETLKRIESGEESENLQDNSALSKSYDPAPSPEYDEVELLKNKRQQLLSPTSVADKWISSTSFVSASTSLSSIS 655
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
18 9992602 9995313 + Carg19050-RA Car18g00924 166626
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car18g00924 655 ProSiteProfiles Protein kinase domain profile. 313 588 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car18g00924 655 Pfam Protein kinase domain 314 583 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car18g00924 655 ProSitePatterns Serine/Threonine protein kinases active-site signature. 433 445 IPR008271 GO:0004672|GO:0006468
Car18g00924 655 MobiDBLite consensus disorder prediction 586 616 - -
Car18g00924 655 ProSitePatterns Protein kinases ATP-binding region signature. 319 341 IPR017441 GO:0005524
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car11g00260 Car-Chr11:1441603 Car18g00924 Car-Chr18:9992602 1.35E-156 dispersed
Car15g00057 Car-Chr15:398012 Car18g00924 Car-Chr18:9992602 5.95E-153 dispersed
Car18g00924 Car-Chr18:9992602 Car12g00472 Car-Chr12:2964459 4.22E-83 dispersed
Car10g00292 Car-Chr10:1407109 Car18g00924 Car-Chr18:9992602 2.87E-153 wgd
Car13g00848 Car-Chr13:9088495 Car18g00924 Car-Chr18:9992602 7.45E-15 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
89536 PF00069 Pkinase 1.00E-48 CL0016 Car PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car18g00924 - - bhj:120081441 998.038