Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car18g00925 ATGGCTTCCAGAGAAGGGAGGCGTCGCCATCATCATCATCATCATCATCATCATAATCTGGTGCCTCTTGCTGCTTTGATCGGTAAAGAGGTGAGGAATGAGAGATTGGAGAAGCCGACTATAAGATATGGGAGTGCTGCGCAGTCTAGGAAGGGGGAGGATTATTTTCTTATGAAAACTGATTGTCAGCGAGTACCTGGGAACCCTTCATCCACTTTCTCTGTATTTGCTATATTTGATGGACACAATGGAAATGCTGCTGCAATTTTCACCAGGGAACATTTGTTGAGCCATGTCTTAGGTGCGCTTCCTCGTGGCCTCGGGCAGGAGGAGTGGCTTCAAGCTCTACCTCGAGCTTTGGTTGCTGGATTTGTGAAGACAGACAAGGAGTTTCAAAGCCGAGGTGAAACTTCTGGAACTACAGCTACGTTTGTAATCATCGATGGATGGACAGTGACAGTAGCGTCGGTTGGAGACTCTCGATGTGTTTTAGATACTCAGGGTGGTGCTGTCTCTGCGTTAACGATCGATCATAGACTTGAAGATAATGTTGAAGAGCGAGAACGTGTGACCGCCAGCGGCGGGGAGATCGGAAGATTAAGCATTGTTGGTGGTGCTGAGATCGGTCCGCTCCGGTGTTGGCCTGGAGGCTTATGCCTTTCTCGATCGATCGGAGACAGGGACGTTGGAGAGTTTATAGTTCCCATTCCATTTGTTAAACAAGTGAAGTTATCAACTGCTGGTGGGAGGCTTATAATTGCTTCTGATGGCATCTGGGACGCCCTATCATCGGATATGGCTGCGAAGTCCTGCCACATAATTCCTCCTGATAACTCAGCTCAGTCTTCTCCTCCTCCAAAGAAACAAAGCGTACTGAAATCTCTATTGTTCAGGAAAAAGTCTCACAGTTCTAATAAGTTATCAAAGAAACTATCAGCTATCGGTCTCGTGGAAGAACTATTTGAAGACGGCTCCGCCATGCTGGCTGACAGGCTTGGAAGTGTAGAGTTGAGCGGATCAAGACATGGCACACCCAGCCTATTCACTTGTGCTGTATGTCAAGTGGATCTTGCTCCAAGTGAGGGCATCTCTGTTCATGCTGGTTCCATCTTCTCCACCAGTTCAAAGCCATGGCAAGGCCCTTTCCTGTGCGCCGATTGTCGAAACAAGAAGGACGCCATGGAAGGAAAACGTCCGAGCGGGGTGCGAGTGGCGTAG 1218 48.6 MASREGRRRHHHHHHHHHNLVPLAALIGKEVRNERLEKPTIRYGSAAQSRKGEDYFLMKTDCQRVPGNPSSTFSVFAIFDGHNGNAAAIFTREHLLSHVLGALPRGLGQEEWLQALPRALVAGFVKTDKEFQSRGETSGTTATFVIIDGWTVTVASVGDSRCVLDTQGGAVSALTIDHRLEDNVEERERVTASGGEIGRLSIVGGAEIGPLRCWPGGLCLSRSIGDRDVGEFIVPIPFVKQVKLSTAGGRLIIASDGIWDALSSDMAAKSCHIIPPDNSAQSSPPPKKQSVLKSLLFRKKSHSSNKLSKKLSAIGLVEELFEDGSAMLADRLGSVELSGSRHGTPSLFTCAVCQVDLAPSEGISVHAGSIFSTSSKPWQGPFLCADCRNKKDAMEGKRPSGVRVA 405
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
18 9998470 10002863 + Carg19051-RA Car18g00925 166627
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car18g00925 405 MobiDBLite consensus disorder prediction 1 20 - -
Car18g00925 405 Pfam Protein phosphatase 2C 68 270 IPR001932 -
Car18g00925 405 ProSiteProfiles PPM-type phosphatase domain profile. 35 331 IPR001932 -
Car18g00925 405 MobiDBLite consensus disorder prediction 1 21 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car04g01548 Car18g00925 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car01g01442 Car-Chr1:12406566 Car18g00925 Car-Chr18:9998470 1.84E-149 dispersed
Car09g00187 Car-Chr9:943952 Car18g00925 Car-Chr18:9998470 2.04E-158 dispersed
Car18g00925 Car-Chr18:9998470 Car15g00023 Car-Chr15:232537 9.58E-22 dispersed
Car10g01000 Car-Chr10:9694805 Car18g00925 Car-Chr18:9998470 2.17E-153 transposed
Car11g01047 Car-Chr11:7986940 Car18g00925 Car-Chr18:9998470 5.11E-165 transposed
Car18g00925 Car-Chr18:9998470 Car04g01548 Car-Chr4:8993847 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car18g00925 - - csv:101216777 714.146