Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Car18g00958 | ATGCCTACCATTAACCTAGGCCAGATTCCAAGTTTCGAAGAACATGTTAATGGCTTTGATCAACATGATGTGTTGGTTGAGGAGATTGAAGGTCTCATTAGAGTTTACGGAAATGGGTATGTGGAAAGAGCACAGATAGTTCCCTGTGTCTCTAATGCATTGCCGCCAGAGCTGGGTGTTACTTCTTGGGATGTAGTTGTGAATAAGCTGAGTAACATTTGGGCTCGTTTCTATATCCCAAAACAGTGCCAGGGGAAACTTCCTTTGCTTGTCTATTTCCATGGAGGTGGATTTTGTGTCGGCTCGGCAGCTTGGAGCTGCTACCATGAGTTCCTTGCCAAGGTATCTGCAAAAGCTGAGTGTATAATTATGTCTGTGAATTATCGTTTGGCACCAGAAAACCCTCTTCCTGCTCCTTATGAAGATGGATTAAAGACCATTTCATGGTTGAAACAAGTTGCTCTTATTGGGGGCAAGCAGAATTGGTGGTCAAGATACTGTGACTTTACCAGAATCTACCTTGGTGGTGATAGTGCGGGTGGCAACATAGCCTTCAATGTAGCCGCCAGACTTGGTGGTAAGACCACTGCTTCTGGAGCTGTGGTCTTGAAGCCGTTGGTTATTAGAGGTAACATTTTGATACAACCATTTTTTGGTGGGGAGTCCAGGACCAAATCAGAGAAGTTTCTAGTCCAACCTCCTCGTTCGGCACTGACGATGGCGGTTTCCGATACATACTGGCGGTTGGCATTGCCGTCTGGGGCAAACCGTGACCACCCTTGGTGCAATCCTTCGGCAAAAGGGCTGTTTAAGGTGGAGAATTTGAGGGTTTTGCCTAGTTTGGTATGTATATCGGAATTGGACATATTGAAAGATAGGAACTTGGAGTTCTGCTCTGCTTTACATAGAGAGGGTAAGCTGATCAATTATGTGGTTCATGAAGGAGTTGGCCATGCCTTTCAGGTTCTGAACAAATCACAACTCTCACAGACTCGGACTCTTGAAATGATTGGTCATATCAAGGATTTCTTATGTGTATAG | 1041 | 44.96 | MPTINLGQIPSFEEHVNGFDQHDVLVEEIEGLIRVYGNGYVERAQIVPCVSNALPPELGVTSWDVVVNKLSNIWARFYIPKQCQGKLPLLVYFHGGGFCVGSAAWSCYHEFLAKVSAKAECIIMSVNYRLAPENPLPAPYEDGLKTISWLKQVALIGGKQNWWSRYCDFTRIYLGGDSAGGNIAFNVAARLGGKTTASGAVVLKPLVIRGNILIQPFFGGESRTKSEKFLVQPPRSALTMAVSDTYWRLALPSGANRDHPWCNPSAKGLFKVENLRVLPSLVCISELDILKDRNLEFCSALHREGKLINYVVHEGVGHAFQVLNKSQLSQTRTLEMIGHIKDFLCV | 346 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 18 | 10174168 | 10175208 | - | Carg21572-RA | Car18g00958 | 166660 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Car18g00958 | 346 | Pfam | alpha/beta hydrolase fold | 90 | 321 | IPR013094 | GO:0016787 | |
| Car18g00958 | 346 | PANTHER | CARBOXYLESTERASE 6-RELATED | 15 | 344 | - | - | |
| Car18g00958 | 346 | SUPERFAMILY | alpha/beta-Hydrolases | 24 | 344 | IPR029058 | - | |
| Car18g00958 | 346 | PANTHER | ARYLACETAMIDE DEACETYLASE | 15 | 344 | - | - | |
| Car18g00958 | 346 | Gene3D | alpha/beta hydrolase | 32 | 345 | IPR029058 | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Car01g00400 | Car-Chr1:2289505 | Car18g00958 | Car-Chr18:10174168 | 3.62E-129 | dispersed | |
| Car02g00301 | Car-Chr2:2018906 | Car18g00958 | Car-Chr18:10174168 | 8.70E-47 | dispersed | |
| Car09g00406 | Car-Chr9:2251647 | Car18g00958 | Car-Chr18:10174168 | 1.10E-53 | dispersed | |
| Car18g00958 | Car-Chr18:10174168 | Car09g01079 | Car-Chr9:10029348 | 9.45E-46 | dispersed | |
| Car02g00988 | Car-Chr2:6991057 | Car18g00958 | Car-Chr18:10174168 | 3.07E-61 | transposed | |
| Car05g00414 | Car-Chr5:2352622 | Car18g00958 | Car-Chr18:10174168 | 2.64E-54 | transposed | |
| Car07g00806 | Car-Chr7:4274253 | Car18g00958 | Car-Chr18:10174168 | 3.82E-58 | transposed | |
| Car18g00958 | Car-Chr18:10174168 | Car04g01576 | Car-Chr4:9133039 | 0 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Car18g00958 | - | - | csv:101213887 | 663.299 |