Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car18g00976 ATGGCTTCCGAGAGCGATTCCAGATCCAGTTCCGCGGCCGATTCGTATGTTGGAAGCTTGATTAGCTTGACTTCCAAGAGCGAGATTAGATACGAAGGCGTTCTTTACAACATCAACACCGAAGAGTCTAGTATCGGACTTAGAAATGTACGGTCATTTGGAACGGAAGGGAGAAAGAAGGATGGGCCACAAGTCCCACCAAGTGACCAAGTTTTTGAATACATCTTGTTTCGTGGAAGTGATATCAAGGATCTACAGGTAAAATCTTCCCCGCCTGTTCAGACTACATCCTTGATAAACAATGATCCAGCTATTATTCAGTCTCACTATCCTCGTCCAGTATCGATTCCTTCGAGCCTGCCTCCTCCTGTTAGTGGGCCTTTGCCTGATATTAATTCTCAGGCCATGCCAATGGGAATTCCTGGATCTAATTTCCAGAGTGGGTTGCCTTTATATCAACCAGGAGGAAATGTGGGGTCTTGGGGAGCTTCTCCTTCGCAACCTCCTCCAAATCCAAGTGCTGGTGGACTTGGTTTGCCAATGTACTGGCAAGGGTATTATGGCCACCCTAATGGACTTCCTCACATGCATCAGCAATCGTTACTTCGTCCACCACCTGGCCTGTCGTTGCCTTCTTCCTTGCAGCAGCCACTGCAATATCCTAATCTTAATGCTTATTTACCCACTGGGGCACCAAATCCATTAGAAGTTTCATCTTCTTTATTCTCTGCTAATCCTACCGCTCCTAGTTTATCATCCACAGCAATGCCACCAGTTACTGTATCTTCAACACTTCCATCTGTGCTGTCTGTTCCACAGACGTCTGAGATGTCATCAAGCTCAATGGTCAACAAGACAATAAATTCTGCTCTTCCTCAAGCTCCCATAAGTACCAATTTGACATCGCTATCTCCTTTGACTGCAAGTTTAGATGTCAGTCCTGTTGTGCCTCCAACTACTAACAAAACTACTACAGTTTCTGGTCCAGCATTGTCTTATCAAACTGTCTCTCAGTCTACATCCTCTATTATTGGAACATCGAATTCTGTTCTCACAAGTGCGCCTGCACCTGCCCTTGTGACTCCAGACCAGCTGTTACATACTACTGTAGTCTCTTCATCTCTGCCTTCGCAAACAGTTCAGAAGGATGTGGAAGTGATTCAAGCATCTTCCTCACTAGCAGCGGAACAAACTGTTCCAGTTCCAGCAGATACTCAGCCACCGTTATTACCATTACCAACGTCTTCACGAGTTGTTCAAAAGAACCAACATCCAACAGAGAAATTCACAGAAGATTTTGACTTCATGGCAATGAATGAGAAATTTAACAAGGATGAAGTCTGGGGTCATCTTGGCAAGAATACCAAATCTCCAAAATACAACGACGGGGATGAAAAATTCAGTGATGAAGACGACGACTATGAAGAAGATGACGGTGAATCATCGAAGTTAGGGATCAAGTCTGTGTACAATAAGGACGACTTTTTTGATACTCTCTCAAGCAACACGACTAACAATGAAGCTCAGAACGATACCGAGGTGGTCGTGGTGGTTTTGGTTCTGGACGCGGTGGTCGTCTTTAGTTCTAGCTTCGGCCATCTTCCCCCCGCCCCAGATGACCGTATCTTCGATGTTCTGCATCCTTTGTTCATGGTAATTGGTTTCATTCTACTCAGCGGAGAAGCCATTTTGGTTCATAGTTGGCTGCCTGGTTCGAGGAATTTGAGGAAATCTGTTCATCTGATTCTTCAAGGGCTGGCTTTGACTTCTGGGTTTTTTGGAATTTGGACTAAGTTTCATTGGGATCGTGGCTTTCTGGCTAACTTCCACAGCGTACATTCTTGGTTGGGTTTGAGCGTTTTCACTTTGTTTGGAGCTCAGTGGATGATGGGTTTTCTGAGCTTCTGGCATTGGAGGGAGGTGAGAGCAACAAGAGAAAGAGTGCTGCCATGGCATGTATTCCTTGGGCTATACAGTTATGCATTGGCAGTGACAGTAGCAGAAACAGGGCTTCTAGAGAAGCTGACATTGTTGCAAACAAAGAGAAATGTCCCTAGAAAAGGCCCTGAAGCCATGGTTGTCAACAGTCTAGGCCTGGCCTTGGCTTTGCTCGGTGGAACTGTGGTGCTCACTGCTATATCTCCTAAATATACTCCTTCACTTCCCACCATCAAACAGCCGTTTGTCTCCAATTCAAAGCCTTTGTCTTCTTAA 2214 45.35 MASESDSRSSSAADSYVGSLISLTSKSEIRYEGVLYNINTEESSIGLRNVRSFGTEGRKKDGPQVPPSDQVFEYILFRGSDIKDLQVKSSPPVQTTSLINNDPAIIQSHYPRPVSIPSSLPPPVSGPLPDINSQAMPMGIPGSNFQSGLPLYQPGGNVGSWGASPSQPPPNPSAGGLGLPMYWQGYYGHPNGLPHMHQQSLLRPPPGLSLPSSLQQPLQYPNLNAYLPTGAPNPLEVSSSLFSANPTAPSLSSTAMPPVTVSSTLPSVLSVPQTSEMSSSSMVNKTINSALPQAPISTNLTSLSPLTASLDVSPVVPPTTNKTTTVSGPALSYQTVSQSTSSIIGTSNSVLTSAPAPALVTPDQLLHTTVVSSSLPSQTVQKDVEVIQASSSLAAEQTVPVPADTQPPLLPLPTSSRVVQKNQHPTEKFTEDFDFMAMNEKFNKDEVWGHLGKNTKSPKYNDGDEKFSDEDDDYEEDDGESSKLGIKSVYNKDDFFDTLSSNTTNNEAQNDTEVVVVVLVLDAVVVFSSSFGHLPPAPDDRIFDVLHPLFMVIGFILLSGEAILVHSWLPGSRNLRKSVHLILQGLALTSGFFGIWTKFHWDRGFLANFHSVHSWLGLSVFTLFGAQWMMGFLSFWHWREVRATRERVLPWHVFLGLYSYALAVTVAETGLLEKLTLLQTKRNVPRKGPEAMVVNSLGLALALLGGTVVLTAISPKYTPSLPTIKQPFVSNSKPLSS 737
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
18 10297132 10303604 - Carg21554-RA Car18g00976 166678
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car18g00976 737 ProSiteProfiles DFDF domain profile. 421 457 IPR025762 -
Car18g00976 737 MobiDBLite consensus disorder prediction 449 465 - -
Car18g00976 737 MobiDBLite consensus disorder prediction 449 482 - -
Car18g00976 737 Pfam FDF domain 427 511 IPR019050 -
Car18g00976 737 ProSiteProfiles Cytochrome b561 domain profile. 508 713 IPR006593 -
Car18g00976 737 ProSiteProfiles FFD box profile. 488 503 IPR025761 -
Car18g00976 737 Pfam Scd6-like Sm domain 16 89 IPR025609 -
Car18g00976 737 Pfam Eukaryotic cytochrome b561 546 676 IPR006593 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car18g00976 Car-Chr18:10297132 Car19g00304 Car-Chr19:4571821 2.23E-18 dispersed
Car15g00204 Car-Chr15:1108665 Car18g00976 Car-Chr18:10297132 1.05E-46 wgd
Car15g01281 Car-Chr15:10000724 Car18g00976 Car-Chr18:10297132 5.15E-177 wgd
Car18g00976 Car-Chr18:10297132 Car04g01593 Car-Chr4:9219614 0 wgd
Car18g00976 Car-Chr18:10297132 Car04g02735 Car-Chr4:21142225 3.25E-41 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car18g00976 K18749 - csv:101205721 716.457