Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car18g00985 ATGGCGGCCGTAGCACCGGTGCCTAATTCGTCTCCATCGCCGGCTTCTCCCTCCACTCCATCTACTCCGCCGCCCAGTACTCCGTCACCGTTGCCACCCCAACCTCCTTCTCCGCCGCCGCTACAATCGCCTCCTCCAGATCCTTCTGGCCCTTCAATTCCGACTCCGTCCCCATCAGGCCAGTCCTCTCCTCCTCCGCCGTCTCGTCAACCATCTGCTACTTCACCGCCACCTGCTTCTGGAACTCCGCCCCCTGTAACACCCGCATTGTCTCCTCCGCCGCCTCGGACTGTTCCACCGGCAACTCCACCACCAACTCCGTCCAGTGCTCCACCCCCGTTAACACTGGATCCCACACCACCATCAGCAACCCCACCAGTAAACTCCCCTCCACCAACGTCATCTAATCCCCCACCACCAAATTCACCTCCACCTCCTGTAGCAGAGCCTCCTCAAACCCCTCCTCCACAGTCATCAAACCCTCCTCAACTCTCATCTCCGCCACCTCTGCCACCACCACCACAAGAAAACCCCTCGGATAATCCATCGCCGCCGCCCACAGCCCCAGTTGAGAATCCTCCCCCAACACCACCATCAGCACCTCCAGAAACTTCACCTCAACCCCCAGCGTCAATACCTCCTAGAAACTCACCTCCACCTCAAAGGCTCACTTCTCCTCCTCCTCCCAGTGATCCCCCAGCTTCAAGTCCTCCCCCTCCCAGTGACCCCCCAGCTTCAAGTCCTCCCAAGCCATCGCCGCCCGCATCAATTTCGCCTCCTCCACCATCCCTTGTTTCTCCTCCAGTATCGTCTAAAACCCCAACATTGCCGCCAGGAAATCCCACGGACGATGGTTCGGGTCCTAATGGCGGAGTAAACTCGAATTCGAACAGCAATGGAGGAATAAATACTGGGAGTGTGATTGCAATTGGTGTAGTGGCTGGAATTGTAGTGCTTGCCATAGTTGGTTTTGTTGTATGGTACATCAGGAAGCCAAGAAAAAATGATTCTGGTCGTAGGGGTTACATTATACCATCTTCTATGGGCTCCTCACCTAAGTCAGAATCCCTTATGAAGGTCCATTCCACACTTCACCAAGACAGACATGGTGGTGGGACATTCTCTCCAAAAGAGTTTGGTGGGTTGGGCAATTCAAGGTCATTCTTTACATATGAAGAACTTTTCAAAGCAACAAATGCATTTTCTGCTCAGAATCTTTTGGGAGAAGGTGGATTTGGTTCTGTTTATAAAGGATATCTACCAGATGGAAGAGAGGTTGCAGTGAAGGAGCTAAAGATTGGTGGTGGTCAGGGTGAGCAGGAATTCAAAGCTGAAGTCGAGATAATTGGTCGCGTACACCACCGCCATTTGGTTTCTCTTGTGGGCTACTGCATTTCAGAGCATCAGAGGTTGCTGGTTTATGATTATGTGTGTAACAATTCCCTTTACTACCATCTTCATGTTAAAGGGGACGACCAGCTCGTTCTGGACTGGGCAAGACGCATTAAGATTGCAGCTGGTGCAGCCCGGGGAATAGCTTATCTTCATGAAGACTGCCATCCTCGAATTATCCACCGTGATATCAAATCTTCAAACATTCTTCTAGATGAAAATTTTGAAGCTCGGGTTTCAGACTTCGGGCTGGCTAAATTAGCTCTTGATGCACAGACTCATATAACCACTCGTGTCGTGGGAACTTTCGGATATGTTGCCCCTGAATATGCATCGAGTGGGAAGTTAACTGAGAGATCGGATGTATATTCTTTTGGAGTCGTACTTCTCGAGCTGATTACTGGTCGAAAGGCCGTTGATGCATCCCAACCGATGGGGGACGAGAGCCTTGTTGAATGGGGTCGGCCTTTACTAAACCATGCGCTCCACAGCCAAGATTTTGAAAGGTTGGTGGACCCAAGGCTTGAAAGGAACTATGTTGAGAGTGAAATGTTGAAGATGATAGGAATAGCTGCTGCTTGTGTTCGGCATGCGTCCGCAAAGAGACCACAGATGGGACAGGTTGTTCGAGCTTTTGATAGTTTAGCTGCAACAGATTTAAGTAATGGAATGAGATTCGGGGAGAGTCAAGCCTTCGACTCCGGTCAGAAGTCTGCTGAGATTAGGTTTTTCCGAATGCTGGCATTTGGAAACCAAGATTACAGCTCAGACTTTTATAGCCAAGGCTATGCTTCTGCTCTTGAACATGGCAGATTTGCACAAGAGCAAGAAAACAGCATCCTATCCAATGTGTACACACGTCGAAGAAAGCTTCTATTTTCGACGATAAACAGTGAAGATCAAGACTGA 2301 50.24 MAAVAPVPNSSPSPASPSTPSTPPPSTPSPLPPQPPSPPPLQSPPPDPSGPSIPTPSPSGQSSPPPPSRQPSATSPPPASGTPPPVTPALSPPPPRTVPPATPPPTPSSAPPPLTLDPTPPSATPPVNSPPPTSSNPPPPNSPPPPVAEPPQTPPPQSSNPPQLSSPPPLPPPPQENPSDNPSPPPTAPVENPPPTPPSAPPETSPQPPASIPPRNSPPPQRLTSPPPPSDPPASSPPPPSDPPASSPPKPSPPASISPPPPSLVSPPVSSKTPTLPPGNPTDDGSGPNGGVNSNSNSNGGINTGSVIAIGVVAGIVVLAIVGFVVWYIRKPRKNDSGRRGYIIPSSMGSSPKSESLMKVHSTLHQDRHGGGTFSPKEFGGLGNSRSFFTYEELFKATNAFSAQNLLGEGGFGSVYKGYLPDGREVAVKELKIGGGQGEQEFKAEVEIIGRVHHRHLVSLVGYCISEHQRLLVYDYVCNNSLYYHLHVKGDDQLVLDWARRIKIAAGAARGIAYLHEDCHPRIIHRDIKSSNILLDENFEARVSDFGLAKLALDAQTHITTRVVGTFGYVAPEYASSGKLTERSDVYSFGVVLLELITGRKAVDASQPMGDESLVEWGRPLLNHALHSQDFERLVDPRLERNYVESEMLKMIGIAAACVRHASAKRPQMGQVVRAFDSLAATDLSNGMRFGESQAFDSGQKSAEIRFFRMLAFGNQDYSSDFYSQGYASALEHGRFAQEQENSILSNVYTRRRKLLFSTINSEDQD 766
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
18 10354626 10359325 - Carg21544-RA Car18g00985 166687
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car18g00985 766 MobiDBLite consensus disorder prediction 1 298 - -
Car18g00985 766 ProSiteProfiles Protein kinase domain profile. 401 679 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car18g00985 766 MobiDBLite consensus disorder prediction 10 275 - -
Car18g00985 766 MobiDBLite consensus disorder prediction 276 298 - -
Car18g00985 766 ProSitePatterns Serine/Threonine protein kinases active-site signature. 523 535 IPR008271 GO:0004672|GO:0006468
Car18g00985 766 ProSitePatterns Protein kinases ATP-binding region signature. 407 429 IPR017441 GO:0005524
Car18g00985 766 Pfam Protein tyrosine and serine/threonine kinase 404 674 IPR001245 GO:0004672|GO:0006468
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car04g01604 Car18g00985 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car18g00729 Car-Chr18:8428061 Car18g00985 Car-Chr18:10354626 7.09E-157 dispersed
Car18g00985 Car-Chr18:10354626 Car14g00853 Car-Chr14:5024085 6.93E-97 dispersed
Car15g00207 Car-Chr15:1142382 Car18g00985 Car-Chr18:10354626 0 wgd
Car18g00985 Car-Chr18:10354626 Car04g01604 Car-Chr4:9273625 0 wgd
Car18g00985 Car-Chr18:10354626 Car04g01766 Car-Chr4:10109406 1.00E-82 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
89539 PF07714 PK_Tyr_Ser-Thr 1.80E-43 CL0016 Car PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car18g00985 - - cmo:103489228 737.643