Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car18g00991 ATGGGTTTTGATCTTCAACATCATTTGAGGATGATTCTAATGGGAATTAGAACAGAGCTTCCCCTGTTCTTCTTGTTTTGCTTATGGTGTTCTTCTGTAAATGGGTTGCTTACTGCAAAAGGTGTCAACTTTGAAGTGCAAGCCCTGATGGCGATCAAAGCTGCTCTGAAAGACCCACATTCTGTTCTTAATTGGGATGAAAACGCTGTGGATCCATGTAGCTGGAGCATGATTACTTGTTCTTCAGAGAAATTCGTCATTAGCTTAGGAGCTCCTAGTCAGAACTTGTCGGGTAGCCTGTCGCCGAGCATTGGAAACTTGACCAATCTTCAGTCTGTGCTTCTACAGGACAACAATATATCAGGAACAATCCCAATGGAGCTTGGGAACATACCAAGTCTTGACACTCTTGATCTTTCAAGCAATGGCTTCCATGGAGAAATCCCCATTTCTCTTTCAAATCTCAAGAGTTTGCAGTATCTGAGGTTAAACAACAACAGTCTTTCTGGGGCTATTCCTTCATCTTTAGCCAATATGACTCAGCTGGCATTGCTAGACCTGTCTTTTAACAATCTCAGTGGCCCATTGCCCAGATTGCAAGCCAAAACCTACAACCTTGTTGGGAATTCGTTCGTTTGCTCATCTGGGTCCGAGCTTAGCTGCAACGGAACAGCTCCACCGCTCTTATTTGCAGTCAATACGCCTCGAAACCCACAGCCTTTAGGGCGATCCAAGGGCCACAAATTAGCCTTAGCTTTTGGCTCAAGCCTTGGATGTGTTGTTCTGCTAACTATTGGGTTTGGCTTCTTCATTTGGTGGAGGCAACGACACAACCAGCAGATATTCTTCGATGTAAATGACCAAAGATTTGAAGAAGTGTGCCTTGGGAACCTAAGGATTTTCCAGTTCAGAGAGCTACAAGCTGCTACAAACAACTTCAGCAGCAAAAACTTGGTGGGAAAAGGTGGGTTTGGGAATGTATACAAAGGGTACCTTCAAGATGGTACAGTTATAGCTGTGAAGAGACTAAAAGATGGAAATGCCATGAGAGGAGACGTACAATTTCATACTGAAGTTGAGATGATCAGCCTAGCCGTGCACCGGAACCTCCTCCGTCTCTACGGGTTCTGCATGACAACCACGGAGCGACTGCTGGTTTACCCCTATATGTCGAACGGCAGTGTTGCATCCCGTCTCAAAGCGAAGCCAGCTCTGGATTGGAGTACAAGGAAAGGAATAGCGTTGGGTGCAGCTAGAGGCTTACTGTATTTGCATGAGCAGTGTGATCCTAAGATCATACACAGAGACGTCAAGGCTGCAAATATATTGCTTGATGATTACTGCGAGGCTGTGGTTGGAGATTTTGGACTGGCAAAGCTGTTGGATCACAGAGATTCACATGTGACAACTGCTGTACGAGGAACGGTTGGTCATATAGCTCCCGAGTATCTCTCGACGGGTCAATCCTCTGAGAAAACTGATGTCTTCGGATTTGGAATCCTTCTTCTTGAGCTGATCACTGGACAGAGAGCTCTTGAATTTGGAAAAGCTGCAAATCAGAAAGGAGCCATGCTTGATTGGGTTAGTCAACAATAG 1596 45.3 MGFDLQHHLRMILMGIRTELPLFFLFCLWCSSVNGLLTAKGVNFEVQALMAIKAALKDPHSVLNWDENAVDPCSWSMITCSSEKFVISLGAPSQNLSGSLSPSIGNLTNLQSVLLQDNNISGTIPMELGNIPSLDTLDLSSNGFHGEIPISLSNLKSLQYLRLNNNSLSGAIPSSLANMTQLALLDLSFNNLSGPLPRLQAKTYNLVGNSFVCSSGSELSCNGTAPPLLFAVNTPRNPQPLGRSKGHKLALAFGSSLGCVVLLTIGFGFFIWWRQRHNQQIFFDVNDQRFEEVCLGNLRIFQFRELQAATNNFSSKNLVGKGGFGNVYKGYLQDGTVIAVKRLKDGNAMRGDVQFHTEVEMISLAVHRNLLRLYGFCMTTTERLLVYPYMSNGSVASRLKAKPALDWSTRKGIALGAARGLLYLHEQCDPKIIHRDVKAANILLDDYCEAVVGDFGLAKLLDHRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGQRALEFGKAANQKGAMLDWVSQQ 531
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
18 10395919 10400220 + Carg21538-RA Car18g00991 166693
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car18g00991 531 ProSitePatterns Serine/Threonine protein kinases active-site signature. 432 444 IPR008271 GO:0004672|GO:0006468
Car18g00991 531 Pfam Leucine rich repeat 132 192 IPR001611 GO:0005515
Car18g00991 531 ProSiteProfiles Protein kinase domain profile. 313 531 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car18g00991 531 Pfam Protein kinase domain 314 516 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car18g00991 531 Pfam Leucine rich repeat N-terminal domain 45 81 IPR013210 -
Car18g00991 531 ProSitePatterns Protein kinases ATP-binding region signature. 319 341 IPR017441 GO:0005524
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car04g02120 Car-Chr4:17250211 Car18g00991 Car-Chr18:10395919 9.87E-26 dispersed
Car15g00214 Car-Chr15:1181391 Car18g00991 Car-Chr18:10395919 0 wgd
Car18g00991 Car-Chr18:10395919 Car04g01612 Car-Chr4:9316188 0 wgd
Car18g00991 Car-Chr18:10395919 Car04g01959 Car-Chr4:13558348 4.79E-14 wgd
Car18g00991 Car-Chr18:10395919 Car04g02726 Car-Chr4:21075052 1.96E-65 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
89540 PF00069 Pkinase 3.10E-41 CL0016 Car PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car18g00991 - - cmos:111449699 1047.34