Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car18g00994 ATGGGTATCTCAAATCTCTCCCCTTGCCTTGTTTATGGGCTGATGGGGCTTTGTGGTTTCTTGTCTGTGAGCCACAGCTTGACGTTGGATTACTATGCCAAAACTTGTCCCACTGTGTTGCAGGTTGTGAGGAAAGAGATGGAGTGTGCAGTGCTTTCTGACCCACGCAATGCAGCTTTTGTTGTCCGCTTGCACTTCCATGACTGCTTTGTTCAGGGGTGTGACGGGTCGGTTCTGCTGGACGACACGATAACGTTGCAGGGAGAGAAAAAGGCTTCCACCAACATTCACTCCCTGAAAGGCTTTAGAATCATTGACAGGATAAAGAATAGCCTTGAATCTGAATGTCCAGGGATTGTTTCTTGTGCAGACATACTCACTATTGCAGCCAGGGATGCAGTGATTCTGGTGGGCGGTCCTTACTGGGAGGTTCCTCTTGGAAGAATGGATTCCACAACTGCGGGTTATGAACTAGCAGATGCAAATCTTCCCTCTGCCAATGAGGGGCTGCTGAGTATCATCTCCAAGTTTCTTTATCAGGGTCTCTCTGTCACTGACATGGTAGCTCTATCAGGAGCACACACGATCGGGATGGCGAGGTGCGAGAATTTCAGAGAAAGGATTTACGGGGATTTTGAAGCAACTTCCAACAACGGTAACAACCCGATCTCGAAGTCGTATCTCGACAAGTTGAGATCTATCTGCCCCCGAGTTGGGAAAGCTGCAGAGAACAACATAACAGCAATGGACAATGTGACACCAGAGGTGTTTGACAACTCCTATTTCCACATGCTGATGAGAGGAGAAGGGCTTATGAACTCAGACCAGGAACTGTATTCAAGCCTTCTTGGCATGGAAACAAGAGCACTGGTGAAGAAATATGCTGCTGAACCACTTGCTTTCTTTCAGCAATTCTCTGATTCCATGGTGAAGTTGGGGAATATCACTAACTCTGATAGCTATTTCACTGGGGAAGTTAGAACAAACTGCAGGTTTATCAACACTTGA 1008 47.02 MGISNLSPCLVYGLMGLCGFLSVSHSLTLDYYAKTCPTVLQVVRKEMECAVLSDPRNAAFVVRLHFHDCFVQGCDGSVLLDDTITLQGEKKASTNIHSLKGFRIIDRIKNSLESECPGIVSCADILTIAARDAVILVGGPYWEVPLGRMDSTTAGYELADANLPSANEGLLSIISKFLYQGLSVTDMVALSGAHTIGMARCENFRERIYGDFEATSNNGNNPISKSYLDKLRSICPRVGKAAENNITAMDNVTPEVFDNSYFHMLMRGEGLMNSDQELYSSLLGMETRALVKKYAAEPLAFFQQFSDSMVKLGNITNSDSYFTGEVRTNCRFINT 335
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
18 10411588 10414854 - Carg21535-RA Car18g00994 166696
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car18g00994 335 PANTHER PEROXIDASE 72-RELATED 19 333 IPR000823 GO:0004601|GO:0006979|GO:0020037
Car18g00994 335 Pfam Peroxidase 43 296 IPR002016 GO:0004601|GO:0006979|GO:0020037
Car18g00994 335 Gene3D - 30 334 - -
Car18g00994 335 CDD secretory_peroxidase 27 333 IPR033905 GO:0004601|GO:0042744
Car18g00994 335 Gene3D Peroxidase, domain 2 164 312 - -
Car18g00994 335 PRINTS Haem peroxidase superfamily signature 58 72 IPR002016 GO:0004601|GO:0006979|GO:0020037
Car18g00994 335 PRINTS Haem peroxidase superfamily signature 120 137 IPR002016 GO:0004601|GO:0006979|GO:0020037
Car18g00994 335 PRINTS Haem peroxidase superfamily signature 138 150 IPR002016 GO:0004601|GO:0006979|GO:0020037
Car18g00994 335 PRINTS Haem peroxidase superfamily signature 186 201 IPR002016 GO:0004601|GO:0006979|GO:0020037
Car18g00994 335 PRINTS Haem peroxidase superfamily signature 250 265 IPR002016 GO:0004601|GO:0006979|GO:0020037
Car18g00994 335 ProSitePatterns Peroxidases active site signature. 58 69 IPR019794 GO:0004601
Car18g00994 335 PANTHER PEROXIDASE 11 19 333 - -
Car18g00994 335 SUPERFAMILY Heme-dependent peroxidases 27 334 IPR010255 GO:0004601|GO:0006979|GO:0020037
Car18g00994 335 ProSitePatterns Peroxidases proximal heme-ligand signature. 186 196 IPR019793 -
Car18g00994 335 PRINTS Plant peroxidase signature 36 55 IPR000823 GO:0004601|GO:0006979|GO:0020037
Car18g00994 335 PRINTS Plant peroxidase signature 60 80 IPR000823 GO:0004601|GO:0006979|GO:0020037
Car18g00994 335 PRINTS Plant peroxidase signature 100 113 IPR000823 GO:0004601|GO:0006979|GO:0020037
Car18g00994 335 PRINTS Plant peroxidase signature 119 129 IPR000823 GO:0004601|GO:0006979|GO:0020037
Car18g00994 335 PRINTS Plant peroxidase signature 138 153 IPR000823 GO:0004601|GO:0006979|GO:0020037
Car18g00994 335 PRINTS Plant peroxidase signature 185 197 IPR000823 GO:0004601|GO:0006979|GO:0020037
Car18g00994 335 PRINTS Plant peroxidase signature 248 263 IPR000823 GO:0004601|GO:0006979|GO:0020037
Car18g00994 335 PRINTS Plant peroxidase signature 264 281 IPR000823 GO:0004601|GO:0006979|GO:0020037
Car18g00994 335 PRINTS Plant peroxidase signature 307 320 IPR000823 GO:0004601|GO:0006979|GO:0020037
Car18g00994 335 ProSiteProfiles Plant heme peroxidase family profile. 26 334 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car18g00994 Car-Chr18:10411588 Car03g00656 Car-Chr3:5882799 8.02E-95 dispersed
Car18g00994 Car-Chr18:10411588 Car04g01615 Car-Chr4:9331141 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car18g00994 K00430 - csv:101216779 556.214