Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Car18g01011 | ATGGGGAAAACCGGCGGAAAGCTGCCGAGTTTTTGCCTGAACCGGATCCGGTCTCATGTTCGTGTGCCGATTCAGTCCAAACCGGACTCTGTTTCTGTGAAAACAGGGGAGAGGAAGGGCGGGGAGTTTGATGAGAGTAATGGTGGAGGTAAGCCGGCGTTGGGAATTGGAAGGAAGATAATGATTGTGGTTGATTCCACCATTGAAGCTGAAGGAGCTCTTCAATGGGCGCTCTCAAATACGGTGGAAATTGAAGTAGCAGTGGTGGAAGGGAAGGAGAAAGGGCCAGTGATTGTGGAAGAAGCAAGAAAGCAAGGGGCATCGTTGCTGGTTTTGGGGCAGAAGAAGAAACGGTCGACGACATGGCGGCTTCTGATGATCTGGGCCGGCCACCGGTGGGGTGGCGGCGGAGACGGCGGCGGAACGGTGGAGTATTGTATTCAGAATGCGAGCTGCATGGCGATTGCAGTGAGAAGGAAGAGCAAGAAATTGGGTGGTTATTTGATCACAACAAAACGCCAAAAGGATTTCTGGCTTTTAGCTTGA | 546 | 52.01 | MGKTGGKLPSFCLNRIRSHVRVPIQSKPDSVSVKTGERKGGEFDESNGGGKPALGIGRKIMIVVDSTIEAEGALQWALSNTVEIEVAVVEGKEKGPVIVEEARKQGASLLVLGQKKKRSTTWRLLMIWAGHRWGGGGDGGGTVEYCIQNASCMAIAVRRKSKKLGGYLITTKRQKDFWLLA | 181 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 18 | 10548340 | 10549817 | - | Carg17319-RA | Car18g01011 | 166713 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Car18g01011 | 181 | MobiDBLite | consensus disorder prediction | 26 | 50 | - | - | |
| Car18g01011 | 181 | Pfam | Universal stress protein family | 82 | 158 | IPR006016 | - |
Event-related genes
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| Car04g01745 | Car18g01011 | CCT | |
| Car04g01745 | Car18g01011 | ECH |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Car14g01657 | Car-Chr14:13229419 | Car18g01011 | Car-Chr18:10548340 | 4.29E-12 | dispersed | |
| Car15g00628 | Car-Chr15:3489162 | Car18g01011 | Car-Chr18:10548340 | 4.79E-15 | dispersed | |
| Car11g00200 | Car-Chr11:1154975 | Car18g01011 | Car-Chr18:10548340 | 4.10E-33 | wgd | |
| Car13g00893 | Car-Chr13:9327725 | Car18g01011 | Car-Chr18:10548340 | 8.67E-41 | wgd | |
| Car18g01011 | Car-Chr18:10548340 | Car04g01745 | Car-Chr4:10002835 | 3.22E-83 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Car18g01011 | - | - | cmax:111467624 | 309.301 |