Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Car18g01014 | ATGGCTGTATGTGGGGATGATAAAGATAGAGTGCTGAGGATCCATGAAAGTTTGGAGGAACTTAGTACTGATTTAGCTGATTATATTGCTGAATTATCAGAGGCATCGGTGAAAGAACGTGGGGTGTTTTCTATTGCGTTATCTGGTGGTTCTGTCATTAACTTGATGGGAAAGCTCTGTGAAGCTCCTTACAATAAGACTGTCGACTGGGCCAAGTGGTATATATTTTGGGCTGATGAACGTGTTGTTGCAAAAAGCCATGCCGACAGCAATTATAAGCTTGCAAAGGACAACCTTCTTTCCAAGGTGCCAATTATTCCCAGCCATGTACACTCGATCAATGATTCTGTGTCGGCAGAGGAAGCTGCTGATGAGTACAAGTTCGTGATTCGACAGTTAGTTAAATCCCGCATAGTAAGCGTGTCTGATGTAAGTGACAGTCCTAAGTTTGACCTCATTCTTCTTGGAATGGGTTCTGATGGCCATGTTGCATCATTATTCCCTGATCACTCAGTGCTCGAAGAGAAAGATGAATGGGTTACCTTCATTACCAATTCTCCAAAACCTCCCCCAGAGAGGATCACCTTCACATTGCCTGTGATCAACTCTGCATCCAATGTAGCCATTGTTGTGACAGGTGAAAACAAAGCAGAGACCGTACATTTGGCCATTGACGACGTAGGACCTGACTGCCCACTCCTACCTGCGAGGCTGGTACAGCCAAAGAAAGGAAAGTTGGCATGGTTTTTGGATAAATATGCCGCTTGGAAACTTGACAATTACCAATTTCATGAGCAGGCTTAA | 804 | 44.15 | MAVCGDDKDRVLRIHESLEELSTDLADYIAELSEASVKERGVFSIALSGGSVINLMGKLCEAPYNKTVDWAKWYIFWADERVVAKSHADSNYKLAKDNLLSKVPIIPSHVHSINDSVSAEEAADEYKFVIRQLVKSRIVSVSDVSDSPKFDLILLGMGSDGHVASLFPDHSVLEEKDEWVTFITNSPKPPPERITFTLPVINSASNVAIVVTGENKAETVHLAIDDVGPDCPLLPARLVQPKKGKLAWFLDKYAAWKLDNYQFHEQA | 267 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 18 | 10565825 | 10569941 | - | Carg17316-RA | Car18g01014 | 166716 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Car18g01014 | 267 | Coils | Coil | 18 | 38 | - | - | |
| Car18g01014 | 267 | Pfam | Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase | 18 | 248 | IPR006148 | GO:0005975 |
Event-related genes
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| Car04g01742 | Car18g01014 | CCT |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Car15g00940 | Car-Chr15:6704751 | Car18g01014 | Car-Chr18:10565825 | 1.05E-84 | dispersed | |
| Car16g00023 | Car-Chr16:231953 | Car18g01014 | Car-Chr18:10565825 | 1.43E-68 | dispersed | |
| Car18g01014 | Car-Chr18:10565825 | Car04g01742 | Car-Chr4:9981470 | 0 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Car18g01014 | K01057 | - | csv:101210739 | 484.952 |