Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car18g01017 ATGGGCGAAGCAAACGAAGCAGGAAGTAGAGGATTGGAGAGGGTTCCTCTGCAAATCAAGAAGTACCCAACAGATCTGTTGCAGAGATTTTTGTGTAGCGATTCACGTGAGGCTAAACTTGGGGGTTTTAATGAAGAAGATGAAGAAGAAGCAGGGGAGATTGAGCTCAATCTTGGGCTTTCACTTGGGGGTCGATTTGGGGTTGATAAAAATTCCAAGCTTATTCGGTCGTCGTCGGTTGTCGGGACGATACCGCTTTTGAGAGACGATGAGGGCTCTATTCCGGCGGCGGTGTCTTACCCGGCGCTGATTCGGACGGCGTCTCTTCCGCCGGAGACGGAGGAGGAGTGGAGGAAGAGGAAGGCGTTGCAGACATTGAGGCGAATGGAGGCGAAGAGGAGGCGGTTTGAGAAACAGAGGAGTAAGGATGGTATTGGGATTGAAGATGAGAGGCGAGGAATTGATGGTCTTACTGTATTGAATTTGCGAGAGAAAAGGCCTTGTGCTGGTGTGTCGACGGTGGTGCCACCGTTTGGGTTGCCTACATGGGCTGCAGCCGCCCGTCATGTTGGCGGAACTCTGGATGGTGGTGGTGGCGGTGGCGGTGGCTTACCGGTTGTCCGACAGCCCGCGTCTCAGTGTTCCGCTGAATCGCAGGGCGGAAGCTCGTCGGGAATGTCGGAATTGGACAGCAAACACATCCAAGGAACAAGCAATTACGGTGAAGCGAGAAGCTCGTCACAAGAACAAGGCAATCCAGAGGCTGCAGGTTCCGTAGGATCGAATAAGGCGTGTGAGAACCCATCGGGCAGTTCGAAAGCGGAAACAAGAAACCCGAGCGAGAACCGGGGAAGAGAAACGGGAACGACGTCGATGGAAGACATGCCATGTGTGTTCACAATAGGGGATGGGCCTGGTGGGAGAAGGGTGGAAGGGATACTTTACAAGTATGGGAAAGGGGAGGAAGTGAGGATAATGTGTGTATGCCATGGGAAGTTTCTGTCACCGGCGGAGTTTGTGAAGCATGCTGGTGGGAAGAATGTGGCTCATCCGCTAAGACACATAGTTGTCAATCCCAATTCTGGCCCTTCTTTGTGA 1098 52.91 MGEANEAGSRGLERVPLQIKKYPTDLLQRFLCSDSREAKLGGFNEEDEEEAGEIELNLGLSLGGRFGVDKNSKLIRSSSVVGTIPLLRDDEGSIPAAVSYPALIRTASLPPETEEEWRKRKALQTLRRMEAKRRRFEKQRSKDGIGIEDERRGIDGLTVLNLREKRPCAGVSTVVPPFGLPTWAAAARHVGGTLDGGGGGGGGLPVVRQPASQCSAESQGGSSSGMSELDSKHIQGTSNYGEARSSSQEQGNPEAAGSVGSNKACENPSGSSKAETRNPSENRGRETGTTSMEDMPCVFTIGDGPGGRRVEGILYKYGKGEEVRIMCVCHGKFLSPAEFVKHAGGKNVAHPLRHIVVNPNSGPSL 365
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
18 10592467 10594522 + Carg17313-RA Car18g01017 166719
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car18g01017 365 MobiDBLite consensus disorder prediction 211 277 - -
Car18g01017 365 Pfam Putative nuclear localisation signal 103 231 IPR032310 -
Car18g01017 365 Pfam Ethylene-responsive binding factor-associated repression 49 82 IPR012463 -
Car18g01017 365 MobiDBLite consensus disorder prediction 194 296 - -
Car18g01017 365 Coils Coil 119 139 - -
Car18g01017 365 Pfam Tify domain binding domain 323 357 IPR032308 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car04g01739 Car18g01017 CCT
Car04g01739 Car18g01017 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car18g01017 Car-Chr18:10592467 Car19g00139 Car-Chr19:1200977 1.22E-18 dispersed
Car13g00908 Car-Chr13:9410240 Car18g01017 Car-Chr18:10592467 1.67E-30 wgd
Car18g00002 Car-Chr18:6828 Car18g01017 Car-Chr18:10592467 6.20E-38 wgd
Car18g01017 Car-Chr18:10592467 Car04g01739 Car-Chr4:9956341 1.29E-177 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car18g01017 - - cmos:111450062 681.404