Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car18g01018 ATGGCAGCGACGGGTAGAAGTGAAAGAAGTTCGCGTTCAACAGCAGAACAACAGCGACGGGTAGATTTTAGTGGTAGTGTTCGTCCTGAAGGTACTCCTAGGGAAGGGTTCTCATCGCCTTTAAATTTGTTGGAATTGCCAAGTATCGTTCAAATTGACGCAAATGTTATACGATCTGAAGCAGGCACGATTTGTTTGGGAAATCCCGATCGTGGTCTCTACCCGGTTGAATTTAAGGATGATGAGAGCGATGTTTCCAGCGTATATTCTTCCAAATCAGAGGAGAGTTGCGGTTCTCAAGGTCCCGCTTCTCCATCCCAAGTTTTTGATTTTACCCCCAAGTCCGGTGGAGATGTTCTGTCTCCAACTCAATCCCCTCCTCTTCAGACGATGGATCGTGTGGGAGGAAATGAACCATATGATCCATTTAGAATCCCATCTGCAGTTTTCCAAACAAGTAGATCAATCAGCCAATTGGAATGGAGTATTGGTTCAAATGAGTCCTTGTTTAGCATTAATGTCGGAAACAATAGTTTCTCTAGAGATCATATGTTGATGTTGAGTGATTCGCAGAAGTCTAGCGAGTTAACAAAATCAGGCGAGTTGTTTGTGTTTAAACCACCACCTGTGGTTACCACATCGAGAGAAACTGAAGTGGCGAGTGTTGAACTCGAAGAGGAGCCTACAACGGCAGATACCACAGAATATGACATTAAGGACAAAGGGTCTTCGGTTGCTGAAGATCTTAGTGTAAGAAGCGAGCCTACTCCTGCGGTGTCATGGAATTCCTCTAGCAAATCTTGCCGCTCCGGTGGAAGCCAAAGCAGCTCAAATTCCTTCGCTTTCCCCATTTTGGCCGATGAGGAGGTGCAGGGTGGATCTGTGGCTGTGGATGCTAAAAAGAAACATCAAAATACTCAGAGCACTGCTGTCTCTTTAAAATCAACAGCGAAGTCTCAACTTCCCTGCTGTTCATTTTCTGTTCATGTTCTTGTCGCAAATGGAGTTTCTGTTCATGTTCTTGTCGCAAATGGAGTTGCTGTTCATCTTCTTGTTGCAAATGGGGTTGCTCTTCATCTTCTTGTTGCAAATGGGGTTGCTCTTCATCTTCTTGTTGCAAATGGGGCTTCTCTTCATCTTCTTGTTGCAAATGGGGTTGCTCTTCATCTTCTTGTTGCAAATGGGGTTGCTCTTCATCTTCTTGTTGCAAATGGGGCTGCTCTTCATCTTCTTGTTGCAAATGGGGTTGCCCTTCATGTTCATGTCGCAAATGGGATTGCTGTTCATGTTCTTCTTGTTGCAAACGGGATTGCTGTTCATGTTCTTCTTGTTGCCAATGGAGTTTTTGGTCACGTTCTTGCAGCGGATGGAACTGTTGTTCATGTTCTAGTTTCTCATGCAGCTGCTTTAGTTGTCGTTTTCGTCGTTGTTGTCATTTTCGTCGATGTTGTCATTTTCTTCGATGTTGTCGTTTTCATGGTTGCTGTCATTATTATCCTTCTTATCATATTTGTCGTTGTTGTTGAAAAGACACTGTCGTTGAACCTTCCCTTGACATAG 1560 43.97 MAATGRSERSSRSTAEQQRRVDFSGSVRPEGTPREGFSSPLNLLELPSIVQIDANVIRSEAGTICLGNPDRGLYPVEFKDDESDVSSVYSSKSEESCGSQGPASPSQVFDFTPKSGGDVLSPTQSPPLQTMDRVGGNEPYDPFRIPSAVFQTSRSISQLEWSIGSNESLFSINVGNNSFSRDHMLMLSDSQKSSELTKSGELFVFKPPPVVTTSRETEVASVELEEEPTTADTTEYDIKDKGSSVAEDLSVRSEPTPAVSWNSSSKSCRSGGSQSSSNSFAFPILADEEVQGGSVAVDAKKKHQNTQSTAVSLKSTAKSQLPCCSFSVHVLVANGVSVHVLVANGVAVHLLVANGVALHLLVANGVALHLLVANGASLHLLVANGVALHLLVANGVALHLLVANGAALHLLVANGVALHVHVANGIAVHVLLVANGIAVHVLLVANGVFGHVLAADGTVVHVLVSHAAALVVVFVVVVIFVDVVIFFDVVVFMVAVIIILLIIFVVVVEKTLSLNLPLT 519
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
18 10595275 10597586 - Carg17312-RA Car18g01018 166720
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car18g01018 519 MobiDBLite consensus disorder prediction 1 42 - -
Car18g01018 519 MobiDBLite consensus disorder prediction 222 274 - -
Car18g01018 519 MobiDBLite consensus disorder prediction 85 131 - -
Car18g01018 519 MobiDBLite consensus disorder prediction 1 21 - -
Car18g01018 519 MobiDBLite consensus disorder prediction 232 247 - -
Car18g01018 519 MobiDBLite consensus disorder prediction 89 131 - -
Car18g01018 519 MobiDBLite consensus disorder prediction 255 274 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car04g01738 Car18g01018 CCT
Car04g01738 Car18g01018 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car09g01140 Car-Chr9:11905142 Car18g01018 Car-Chr18:10595275 1.83E-17 dispersed
Car10g00280 Car-Chr10:1346380 Car18g01018 Car-Chr18:10595275 3.66E-13 wgd
Car11g00188 Car-Chr11:1078006 Car18g01018 Car-Chr18:10595275 2.15E-12 wgd
Car15g00233 Car-Chr15:1314906 Car18g01018 Car-Chr18:10595275 3.45E-09 wgd
Car18g01018 Car-Chr18:10595275 Car04g01738 Car-Chr4:9953307 1.17E-106 wgd
Car18g01018 Car-Chr18:10595275 Car04g02698 Car-Chr4:20912107 2.62E-12 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car18g01018 - - mcha:111017534 331.643