Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Car18g01022 | ATGGCGGTTTTCGTGTTCTTAGTGTTCTTCCTTGCCCTAACCGGTCAATCTTACGCCAACTATTGCTTGTGTAGAGATGGAGTGAGCCAACAAGTTCTTCAAAAAGCACTGGATTATGCCTGTGGTGCCGGAGCTGACTGTTCTCCGATCCTCTCTAATGGCGCCTGTTTTCAGCCCAACACTGTCAAAGATCACTGCAGCTACGCCGTCAACAGCTATTTCCAGAGAAAAGGTCAAGTCCAGGGAAGCTGTGACTTCTCCGGCGCCGCTACTCCCAGCGTTTCCCTCACCGCCTCTGTGCCCTCCGGCTGCGTCTATCCTTCGAGCCCCAGCAATGCGGGAACCTCGCCGACGAACTCCGGCGGAACTACGCCGGGGACGACTAATCCGGGAATGACGCCGACGGTATTCGGTAACGGAATCAGTCCGAGTGGGAGCGGCGCCGGGTTCAACGACGGCAGCGGTGGCGTGGGTTTCAATGAGAAGATGAACTTGCTTTTGAGTGTGGGCTTAACTCTGTGGCTTTCCGTACTGTTGTTCTAG | 543 | 55.06 | MAVFVFLVFFLALTGQSYANYCLCRDGVSQQVLQKALDYACGAGADCSPILSNGACFQPNTVKDHCSYAVNSYFQRKGQVQGSCDFSGAATPSVSLTASVPSGCVYPSSPSNAGTSPTNSGGTTPGTTNPGMTPTVFGNGISPSGSGAGFNDGSGGVGFNEKMNLLLSVGLTLWLSVLLF | 180 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 18 | 10613031 | 10614458 | - | Carg17308-RA | Car18g01022 | 166724 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Car18g01022 | 180 | MobiDBLite | consensus disorder prediction | 109 | 138 | - | - | |
| Car18g01022 | 180 | Pfam | X8 domain | 21 | 91 | IPR012946 | - |
Event-related genes
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| Car04g01736 | Car18g01022 | CCT | |
| Car04g01736 | Car18g01022 | ECH |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Car05g00390 | Car-Chr5:2228001 | Car18g01022 | Car-Chr18:10613031 | 1.78E-58 | dispersed | |
| Car12g00096 | Car-Chr12:519954 | Car18g01022 | Car-Chr18:10613031 | 1.77E-63 | dispersed | |
| Car18g00006 | Car-Chr18:21027 | Car18g01022 | Car-Chr18:10613031 | 1.31E-46 | dispersed | |
| Car18g01022 | Car-Chr18:10613031 | Car18g00275 | Car-Chr18:1621197 | 4.14E-21 | dispersed | |
| Car10g00286 | Car-Chr10:1377583 | Car18g01022 | Car-Chr18:10613031 | 1.21E-37 | wgd | |
| Car11g00180 | Car-Chr11:1044686 | Car18g01022 | Car-Chr18:10613031 | 1.19E-47 | wgd | |
| Car18g01022 | Car-Chr18:10613031 | Car04g01736 | Car-Chr4:9939161 | 8.41E-96 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Car18g01022 | - | - | cmax:111467729 | 287.345 |