Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car18g01023 ATGGCTTCGATGACTAGCGTAATACAGTCTCCGATTCGTGTATGTCGGTTACCTACACTGCCATTGACTCCGAATAGAACAGTTCCCGCCAGTTCTGTTGTTGTCAAGTGTCGATCACTTGATTCTAAAGCTTTGAACACGCCGCTTTCACCGTTGACGGAGAATCGAACTGTTTCTCCGTCGGTGGAGCTATGTAGCAAGGCTATCGGACTCTTAAGCTCTAGACAACCGTTGACGTCTCGTAGTGTTGTTCGTCGGCTGGTCGTGAGGGCGGCTGCAGCTGATGCCGATGGAGCTTCCGATGGGTTGACTGGCCCTTCAAAGAGCTTTGCCGCAAGATTTCCAGCACTTGTTACTGGTTTCTACTTCTTTATCTTTGTCTCTGTCATACATCTTCTTGTTGGAGTTGGATATTGTCTCATTTCTTGGGCTGTAGGTCTGCCAAAACGTGCTCCGATGGATAAGGAGCTCTTGCTGTTATTGACACCAGTTTCGCTATGCCATGCACTTGGACATGTGATGTCAAATGTTTCATTTGCAGCTGTTGCTGTGTCCTTCACTCACACTATCAAAGCCTTGGAGCCATTCTTTAACGCTGCTGCTTCTCAATTTATTTTGGGACATCAAATTCCCTTCAGCTTGTGGCTCTCTCTAGCACCTGTTGTCTTAGGTGTGTCAATGGCATCACTAACGGAGCTTTCCTTCAACTGGATTGGCTTTGTTAGTGCAATGATTTCAAACATTGCATTCACTTATAGAAGTATCTATTCGAAGAAGGCAATGACAGGAATGGACAGTACGAACGTGTATGCATACACCTCAGTAATTGCTCTTTTCTTTTGCATTCCTCCTGCAGTAATGATCGAAGGACCGCAGCTACTGCAGCATGGTTTTAAGGATGCCATTGTCAAAGTGGGTCTCCAAAAGTTCCTGTCTGATCTTTTCTGGATTGGAATGTTTTATCATCTATACAATCAGCTTGCCACTAATACTCTTGAACGAGTTGCACCATTAACACATGCTGTAGGAAACGTATTGAAGCGAGTTTTTGTGATTGGGTTCTCCATTGTTGTTTTTGGCAATAAAATCTCAACTCAAACTGGAATTGGTACTGCTATAGCAATTGCCGGTGTCGCCATCTACTCCTTGATTAAAGCAAACTTGGAGGAGCAAAAACGGAGGGCTGCTAAAACTCCAGCATCATAG 1206 44.69 MASMTSVIQSPIRVCRLPTLPLTPNRTVPASSVVVKCRSLDSKALNTPLSPLTENRTVSPSVELCSKAIGLLSSRQPLTSRSVVRRLVVRAAAADADGASDGLTGPSKSFAARFPALVTGFYFFIFVSVIHLLVGVGYCLISWAVGLPKRAPMDKELLLLLTPVSLCHALGHVMSNVSFAAVAVSFTHTIKALEPFFNAAASQFILGHQIPFSLWLSLAPVVLGVSMASLTELSFNWIGFVSAMISNIAFTYRSIYSKKAMTGMDSTNVYAYTSVIALFFCIPPAVMIEGPQLLQHGFKDAIVKVGLQKFLSDLFWIGMFYHLYNQLATNTLERVAPLTHAVGNVLKRVFVIGFSIVVFGNKISTQTGIGTAIAIAGVAIYSLIKANLEEQKRRAAKTPAS 401
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
18 10615821 10620978 - Carg17307-RA Car18g01023 166725
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car18g01023 401 Pfam Triose-phosphate Transporter family 123 382 IPR004853 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car16g00554 Car-Chr16:3501529 Car18g01023 Car-Chr18:10615821 3.66E-60 dispersed
Car18g01023 Car-Chr18:10615821 Car16g00851 Car-Chr16:6217793 7.80E-44 dispersed
Car18g01023 Car-Chr18:10615821 Car07g00186 Car-Chr7:1059869 5.01E-163 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car18g01023 K15283 - csv:101221040 616.305