Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car18g01026 ATGTCGATTTTGTTTCCATTTCGGGATCTGGTTGATCTCGCTGCCGACTGTTTGGAAACTGAATTTCTGACCATTGATCGCGTTGGATTGATCGGTTTGAAGTTTGGTTTGAAGAATTCTTGTGCAATTGGGGTTATGCTTTATGCTCTGCTTCGAGATTTAAACAGAAGGCGCTTCCCATTTAGAGTGGTTCTGAACTGGATTATTGAAGGTACTTCAGAAATATTGGACATGAGAAGCTCCTGGGTTAATAAAATATCTGTAATCTTGGGCTCCAAACCACCATTCAACTGGTTAATCTTGTGTCTCATCAGCGTGCTTGCATTAATTGTAGTTCTAGGAACGTCTACTTCAAATGTCTTTGATTCAGTTTCTACCACGCCAGTGTCTGACATTTATACTAGCTATAGAAGGCAAAAAGAAAGGGCCGCAATTGATTTGTTTGACTTAAAGTCTCTTTCATTAGCCACGGGTCGAGTCAAAGAGTTTGGTCTTTGTGGAAAAGAAAGAGAAAACCATGTGCCATGTTACAATGTTACAGCAAATATGTTAGCTGGATACAAAGAAGGGGAGGAGTATGATAGGCACTGTGAAGTGTCTAGAACAGCAGAGCGTTGCCTGGTTCGTCCTCCTAAAGACTACAAGATCCCTCTGAGTTGGCCTGTTGGTAGGGATATAATATGGAGTGGGAATTTGAAGGTAACAAAAGATCAACTTCTGTCTTCTGGGAGCCCTACCAAAAGGTTGATGTTATTAGAAGAGAACCAAATTTCTTTTCACTCGGAGGATGGTGATGGAGTCAAAGAGTATTCCTTTCAAATCGCAGAGATGATTGGTTTAGGCACTGACTCTGAATTTCTTCAGGCTGGTGTACGCTCGATACTTGATATTGGTTGTGGGTTTGGTAGCTTTGGTGCTCATTTAACATCAATGAATGTAATGGTTATGTGCATTGCGACCTATGAGGCGACTGGCAGTCAAGTTCAAATGGCTCTAGAGAGAGGCCTTCCAGCGATGCTTGGCAACTTTATTACAAAACAGCTTCCATATCCATCCTTGTCATTTGACATGGTTCACTGTGCACAATGTGAAATCTCTTGGAACGATAAAGGTGGGATATTCCTTATTGAAGCCGACCGGTTGCTAAGACCTGGAGGTTATTTTGTTTTAACCTCTCCCACAAGCAAGGCAGTCGGTGGTTCATTGTCTTCCAAGAAGATAAGCATTTTGACACCACTGGAAGAGATTACCCGAAGATTATGTTGGACTTTTTTAGCTCAGCAGTATGAAACTTATATTTGGCAGAAAACTACAGATCCTCGTTGCTATTTATCTGGCAAGCAGGAAATTGTACCACTTTGTAAAGAAGGGCATGATACTCCATCATATTATCAACCTCTGGTACCATGCCTAAGTAGTACTACCAGCAAGCGGTGGATTCCAATCCAGAACAGATCTTCCAGTTCTCGTTTGAGTTCAGCTGAACTTGAAGTTCATGGAAAGTATTCTTCCTTAATGGTTCTGTATTGCGTTCAATCAGATGACTACGCTGATGACTTACAAATTTGGCGAACGGCTTTGAAAAACTATTGGTCCTTGCTTACGCCTTTAATTTTCTCTGACCATCCAAAGAGGCCTGGTGATGAAGATCCATTACCTCCATTTAACATGATACGCAATGTGATGGACATGAATGCTCATTATGGGGGTTTAAATGCTGCGTTTGTGGAGCAAAAGAAAACGGTTTGGGTCATGAATGTTGTGCCTGTTGGATCTCCTAATACGCTTCCCCTCATACTTGATCAAGGTTTTGCTGGTGTTCTGCACGATTGGTGTGAACCTTTCCCCACTTATCCACGAACATATGATTTGCTCCATGCAAATGGGCTCCTCTCACAGCTACTTTCAAGTAGGTGCAGCATGCTTGAATTTTTAGTCGAGATGGATCGTATACTGCGCCCTGAGGGATGGGTTATTCTAAATGACAAAGTGGGACCGATAGAGCAGGCGCGAATGCTTGTTACACATATTCGTTGGGAGGCAAGGGTGATCGACTTTCAGAATGGCAGCGACCAAAGGCTCCTTGTTTGCCAGAAACCATTCGTGAAAAAATGA 2115 42.41 MSILFPFRDLVDLAADCLETEFLTIDRVGLIGLKFGLKNSCAIGVMLYALLRDLNRRRFPFRVVLNWIIEGTSEILDMRSSWVNKISVILGSKPPFNWLILCLISVLALIVVLGTSTSNVFDSVSTTPVSDIYTSYRRQKERAAIDLFDLKSLSLATGRVKEFGLCGKERENHVPCYNVTANMLAGYKEGEEYDRHCEVSRTAERCLVRPPKDYKIPLSWPVGRDIIWSGNLKVTKDQLLSSGSPTKRLMLLEENQISFHSEDGDGVKEYSFQIAEMIGLGTDSEFLQAGVRSILDIGCGFGSFGAHLTSMNVMVMCIATYEATGSQVQMALERGLPAMLGNFITKQLPYPSLSFDMVHCAQCEISWNDKGGIFLIEADRLLRPGGYFVLTSPTSKAVGGSLSSKKISILTPLEEITRRLCWTFLAQQYETYIWQKTTDPRCYLSGKQEIVPLCKEGHDTPSYYQPLVPCLSSTTSKRWIPIQNRSSSSRLSSAELEVHGKYSSLMVLYCVQSDDYADDLQIWRTALKNYWSLLTPLIFSDHPKRPGDEDPLPPFNMIRNVMDMNAHYGGLNAAFVEQKKTVWVMNVVPVGSPNTLPLILDQGFAGVLHDWCEPFPTYPRTYDLLHANGLLSQLLSSRCSMLEFLVEMDRILRPEGWVILNDKVGPIEQARMLVTHIRWEARVIDFQNGSDQRLLVCQKPFVKK 704
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
18 10626536 10630932 - Carg17304-RA Car18g01026 166728
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car18g01026 704 Pfam Putative S-adenosyl-L-methionine-dependent methyltransferase 172 699 IPR004159 GO:0008168
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car01g01228 Car-Chr1:11270473 Car18g01026 Car-Chr18:10626536 0 dispersed
Car05g00451 Car-Chr5:2576768 Car18g01026 Car-Chr18:10626536 0 dispersed
Car09g00492 Car-Chr9:2738604 Car18g01026 Car-Chr18:10626536 0 dispersed
Car18g01026 Car-Chr18:10626536 Car08g00955 Car-Chr8:6380417 3.02E-103 dispersed
Car04g01733 Car-Chr4:9925664 Car18g01026 Car-Chr18:10626536 0 transposed
Car18g01026 Car-Chr18:10626536 Car04g01732 Car-Chr4:9924700 6.35E-20 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car18g01026 K23870 - csv:101213009 1224.15