Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car18g01032 ATGGGAACAAAAGTGCAGTATGAAAGTTATTTGCCAGGTTATCATTCAATGAGGGATCTGAATGAAGATTCTCATGGTTGTAGCTGGCCATTATATTATAGTGAAAAAGCGTGTCAGAGCGGCCAATATTATAACGGAATTTTGCCAAGAGCTACCTCAGATGCATATCTAGGCTGTGATAGAGATGCTGTGAAGAGGACAATGCTTGAGCATGAAGCCCTATTCAGGAGCCAGGTTCGTGAACTGCATCGGTTATATATAAAACAAAGAGAGTTAATGAACGATATTAAAAGATCGGAACACAGACACCACATGCCAATTGACATATCGTTCTCCTCTAGTCCTCTAGCATCTCAAAGTACGCCTGAGGGAACGAGGAAATGGCATCTCCCAAGCTTTCCTCTTGCAAATTCTTCCAGTGGTAGACCATCTGCACCTTGCATTGAAGATGTAAAATCATCTTTAAGTTCTTTGAAAGAAAACAATAGAAGCGGTCTCTTACCATCCCAAAACGGAACTAGTTCAAAAGACTGCGAGGTACTAGAATCCAGACCTTCAAAATTTAGGAGGAAAACATTCGATCTTCAACTTCCAGCAGACGAGTACGCTGATAGCGAAGAAGGGGAGGTATTTCATGATGAAAAAGTGCACCCCATGCTGGGTTGCCATTCAAATGGTAACAAGAAATGTGAGACTCAGAGTTGTGTGAATCCTGGTGAAAAGAGTGGCGGCCAAAGTGCTACTTTGAGATCTGACTCGAGTTTGTGGAACAAATGTGGTTTAGCTGACTTAAACGAGCCCATTCAGGTTGAAGAGGCAAATGGGTCCAATTTTTTCGATCTTCCTAGTGCTCGTGACTCCAGCAATGGGGAGACTCAAGGCCCCGTTCCGTCCTATACGAAGCAAGAAATCTTTCCGTGCTCTAGTAATGAAGGTGGACATGCAACGAATAGGAATTCGTATATTGAGAACGGAAATAGAAGGGAGGCATTCCCTAACATCTTTAAAGCAGGTCGTAGTAAAGAGAGTGAGAAACCTTTTAATCATGGTCAGATGGAAAAGTTCCATATATCTTCTAATCCAATGCAAGTTCCACTCAACAAGTTTCATGAACTTCCAGTCTTCTATCTCAATGATAAAAGCAAGCTTCATCAGGAGTTGGACTGGCCAGTTAATGATTTGCAATTTTCCAAAAGAGGTTATGAAATGTCGAATGCTGGAGATCCCGGTTATCGTCTAGCTTCTCAGACGTCTTGTACATATCCGATCGCTCCTTCTGACATGGGCAAGTCTTGGGCTCAGTCTGGTTCGTCTTGGGAAAAGCCGAATGGCAACAGCTCCCAAAAGTCGACATTATTTCATACACAGCCATCCTTGAAATCGTCTGCTGGCGTTCACAAGAGTTTTACTTCATCATCATCTCAGAATAATGGAATTTTTGGAGATAGATGGAATTTGAGTAGTGGGTCAAGATCAAACCCGGGGTCTGGTTGTGAAACTCCTTACCGGAATGGATTTTACCTCGGGCCTACCTCTGGTTCCAAAGGTACCATAAGGCATGACCATGTGACCAACTATTACAATGGCTCGGGTTGTGTGGGCACGAATTCTCCTAGAGACATTAACTTGAATGTAGTGCTCTCAAAAACCTTATCTAATGAGGCAGGTCAACAACTGAATTACAGAACCAGAGAGGCAGAACAAAAGAATGAGGACGATCATAATGTATTACCATGGTCGAGAGCTGTACCTGCTCGTAAGAATGAAACGATCGATTCAAGAAGATTCTCTATGACTGGAGAGCTTAGTTTTGTGCTCTCTCCAAAGAATCAGTTTTCAGACAGAAATGGAACTGAAAATGGCAGTAAAGTTATATGTTATCCGAACATCGAGTCGAATTCACGTTGTAGTAACATTGAGCCCAGAAGGTTGGAACATGGTGAATGCCAGAGTAACAAAAAGCTTCTTGGGTTTCCCATTTTTGAAGGGCCACACGTTTCTAAGAATGAGTCGTTTTCTCTTACATCCCCGTCGGTACCTTTTCCTAATCCATCCGAGAATGACGTGGAAGATAACCAGAAAACTCGAGTATTTGATATCAATTTGCCTTCTGATCCTTCAGTTTTCGAGTCAGATAACGTTACTACTGGATCTCTGACCGTTAGAAATGGAAATGACGCGAAAATTTCTACTGTTAGAGTTAATATTGATTTGAACTCGTGTGTCGACGATGAAGAAGCATCTATGACACCCCTACCTCTGGCTTCTTCGAGTGCCAAGAAAAAGGTTGTGATAGATATAGATTTAGAAGCCCCGGCAATGCCCGAGACTGAAGACGATATCGATGCAGATGGACAGCGATCACAATCTCCTCAGCACAAGGCTGTTGATATTCAGGACGATCTTATGGCTGTAGCAGCAGATGCAATAGTTGCCATCTCTTCTTGTGGGCCTTCCTGTCATTTGGACGATAATGTTAGCAACGTGTTGGAAGATTCTTCGAGCGATCTCCTAAATTGGTTTGCCGAGATAGTTTCCACACGGGGGGATGATGTACAGGTCACGTCTGATACTGTATTGAGAGCCAAAGATGACAAGAATAATGAGGAAACCTCTCTGAGAGGGATTGATTACTTTGAATACATGACATTGAGGCTAGCAGAGGTCGGTGAAGAAGACTACATGCCGAAGCCCCTGCTTCCGGAAAGTATGGAAATCGAAGCTCCTGGAACCAATTTGTTACAAAATCGACCCCGAAAGGGCCAGACGAGGAGAGGAAGGCAGCGGAGGGACTTCCAGAAGGACATCCTTCCAGGCCTTTCCTCTCTATCAAGACATGAGGTTACAGAAGATCTTCAAACATTTGGTGGCCTAATGCGAGCAACAGGCCACTCTTGGCATTGCGGAGTTACGAGGAGGAACTCTACTAGAAATGGTTGCGGTAGGGGAAGACGACGATCAGTGATCAGTCCCCCGCCCCCTGTGCATTCAGCATGTAATCAGCTGATACAGCAACTAAGTAACATTGAAATGGGTCTGGAGGATGGAAGCCTGACTGGTTGGGGCAAGACAACTAGACGACCCCGTCGACAGAGATGCCCGGCCGGTAATCCTCCACCCGTTCCTTTAACTTAA 3135 44.15 MGTKVQYESYLPGYHSMRDLNEDSHGCSWPLYYSEKACQSGQYYNGILPRATSDAYLGCDRDAVKRTMLEHEALFRSQVRELHRLYIKQRELMNDIKRSEHRHHMPIDISFSSSPLASQSTPEGTRKWHLPSFPLANSSSGRPSAPCIEDVKSSLSSLKENNRSGLLPSQNGTSSKDCEVLESRPSKFRRKTFDLQLPADEYADSEEGEVFHDEKVHPMLGCHSNGNKKCETQSCVNPGEKSGGQSATLRSDSSLWNKCGLADLNEPIQVEEANGSNFFDLPSARDSSNGETQGPVPSYTKQEIFPCSSNEGGHATNRNSYIENGNRREAFPNIFKAGRSKESEKPFNHGQMEKFHISSNPMQVPLNKFHELPVFYLNDKSKLHQELDWPVNDLQFSKRGYEMSNAGDPGYRLASQTSCTYPIAPSDMGKSWAQSGSSWEKPNGNSSQKSTLFHTQPSLKSSAGVHKSFTSSSSQNNGIFGDRWNLSSGSRSNPGSGCETPYRNGFYLGPTSGSKGTIRHDHVTNYYNGSGCVGTNSPRDINLNVVLSKTLSNEAGQQLNYRTREAEQKNEDDHNVLPWSRAVPARKNETIDSRRFSMTGELSFVLSPKNQFSDRNGTENGSKVICYPNIESNSRCSNIEPRRLEHGECQSNKKLLGFPIFEGPHVSKNESFSLTSPSVPFPNPSENDVEDNQKTRVFDINLPSDPSVFESDNVTTGSLTVRNGNDAKISTVRVNIDLNSCVDDEEASMTPLPLASSSAKKKVVIDIDLEAPAMPETEDDIDADGQRSQSPQHKAVDIQDDLMAVAADAIVAISSCGPSCHLDDNVSNVLEDSSSDLLNWFAEIVSTRGDDVQVTSDTVLRAKDDKNNEETSLRGIDYFEYMTLRLAEVGEEDYMPKPLLPESMEIEAPGTNLLQNRPRKGQTRRGRQRRDFQKDILPGLSSLSRHEVTEDLQTFGGLMRATGHSWHCGVTRRNSTRNGCGRGRRRSVISPPPPVHSACNQLIQQLSNIEMGLEDGSLTGWGKTTRRPRRQRCPAGNPPPVPLT 1044
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
18 10660439 10666186 - Carg17298-RA Car18g01032 166734
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car18g01032 1044 MobiDBLite consensus disorder prediction 159 179 - -
Car18g01032 1044 MobiDBLite consensus disorder prediction 1014 1044 - -
Car18g01032 1044 MobiDBLite consensus disorder prediction 908 930 - -
Car18g01032 1044 MobiDBLite consensus disorder prediction 159 181 - -
Car18g01032 1044 MobiDBLite consensus disorder prediction 431 457 - -
Car18g01032 1044 Pfam Plant protein of unknown function (DUF863) 142 1034 IPR008581 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car04g01725 Car18g01032 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car05g00381 Car-Chr5:2187178 Car18g01032 Car-Chr18:10660439 6.41E-152 dispersed
Car11g00343 Car-Chr11:1880439 Car18g01032 Car-Chr18:10660439 8.24E-06 dispersed
Car12g00089 Car-Chr12:393595 Car18g01032 Car-Chr18:10660439 9.95E-45 dispersed
Car01g00748 Car-Chr1:4540327 Car18g01032 Car-Chr18:10660439 5.39E-11 wgd
Car13g00927 Car-Chr13:9521766 Car18g01032 Car-Chr18:10660439 1.06E-16 wgd
Car18g01032 Car-Chr18:10660439 Car04g01725 Car-Chr4:9893722 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car18g01032 - - bhj:120080916 1728.76