Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Car18g01102 ATGGAGGAGGAGAAAGAAGCCGGAGTTTCTAGGTTTACAGTTACCAACAATGAAGCCCTAGACACCTTCCAGTTAGCTCCCAGAACAGAAACCCTAAAACCCACCAATGAGCCTAAAGTAACGGCTACGACCACACCGGCGAGCATCCCAACCACTGCACCACCACCGGGATTCACGGCGGTTTCCACTACAGATACAAAGAAGAAGAGAGGTCGGCCGAGAAAGTACGAGGCGGATGGGAAGCGGTCACTGACATTAGCGTTGTCTCCGATGCCGATATCATCGTCAATTCCACTGACCGGCGAGTTCCCGAACTGGAAACGTGACAACGACATGTCTCTAGCGATAATCAAAAAGCCACAGAGATTTGAGTTTGAGAATCCGGGTCAGAAACTTGCATACTCTGTTGGTGCTAATTTTACTCCCCATGTTATCACTGTCAATGCTGGAGAGGACATTACTATGAAGATCATGTCTCTCTCTCAGCAAGAATCCCGAGCTATTTGCATTCTTTCTGCAAATGGCACAATTTCAAATGTCACACTTCGACAGGCCACTTCTTCCGGAGGTACCTTAACGTACGAGGGTTGTTTTGAAATACTCGCATTGACTGGATCGTTTATGCCGACACAGAATGGAGCGACAAAGAGTAGATGTGGTGGGATGAGCGTTTCCCTAGCGGGTCAAGATGGACAAGTCGTCGGCGGTGGACTTGCTGGGTTGTTGGTAGCTGCTGGTCCTGTTCAAGTTGTGGTAGGTAGTTTCCTTCCGGGTCACCAGCAAGAACAGAAGCCAAAGAAGCCTAGAAATGAGGCCACAACCATATTCTTTCCTCCCATCAATACCATCAGTGGTGAAGAAATGAAGGCGGCATACACCAGTGGTATCAAGCCTATTGTCACCACAACGTCCAATCAAGAACATAAGCCACCATCGCCAAGCGCAGTGACACCCTTCAAAATCTCCTCCACTGACAACTTACCTCAAACAGAACAAGAACCCAAAACTCAAAGTCAATCAAACTGTGAGGTTTCTTGTTGA 1041 48.03 MEEEKEAGVSRFTVTNNEALDTFQLAPRTETLKPTNEPKVTATTTPASIPTTAPPPGFTAVSTTDTKKKRGRPRKYEADGKRSLTLALSPMPISSSIPLTGEFPNWKRDNDMSLAIIKKPQRFEFENPGQKLAYSVGANFTPHVITVNAGEDITMKIMSLSQQESRAICILSANGTISNVTLRQATSSGGTLTYEGCFEILALTGSFMPTQNGATKSRCGGMSVSLAGQDGQVVGGGLAGLLVAAGPVQVVVGSFLPGHQQEQKPKKPRNEATTIFFPPINTISGEEMKAAYTSGIKPIVTTTSNQEHKPPSPSAVTPFKISSTDNLPQTEQEPKTQSQSNCEVSC 346
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
18 11045895 11049005 - Carg17228-RA Car18g01102 166804
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Car18g01102 346 Coils Coil 343 346 - -
Car18g01102 346 MobiDBLite consensus disorder prediction 24 48 - -
Car18g01102 346 MobiDBLite consensus disorder prediction 302 346 - -
Car18g01102 346 ProSiteProfiles PPC domain profile profile. 137 281 IPR005175 -
Car18g01102 346 Pfam Plants and Prokaryotes Conserved (PCC) domain 142 255 IPR005175 -
Car18g01102 346 MobiDBLite consensus disorder prediction 24 76 - -
       

Event-related genes


       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car15g01247 Car-Chr15:9673141 Car18g01102 Car-Chr18:11045895 4.04E-64 dispersed
Car16g00986 Car-Chr16:8368895 Car18g01102 Car-Chr18:11045895 2.92E-76 dispersed
Car18g01102 Car-Chr18:11045895 Car01g01608 Car-Chr1:13213409 7.40E-57 dispersed
Car15g01061 Car-Chr15:8352036 Car18g01102 Car-Chr18:11045895 2.80E-85 wgd
Car18g01102 Car-Chr18:11045895 Car02g00752 Car-Chr2:5508278 2.71E-101 wgd
Car18g01102 Car-Chr18:11045895 Car02g01272 Car-Chr2:8526097 1.25E-76 wgd
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car18g01102 - - csv:101217222 527.324