Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car18g01106 ATGCTTCATCGGTTCTTTATGGCGAGAAGAGGAGGAGCAATTGGATCATGGCTTTGCATCGTTCTGGTTTTAATTTCTGCGCAAATTCATGTCTCAGCCAGATCGGATAAGGAAATTAGGGAAAGATTTTATGGAAACTTGATCAACTCAACGGCACCGATTTCCGGTGACGGTAGCATTGCCCAAATGTTCGATAAGGTGCTCGAGAAGGAGTTCCCTGACAATGATCTGCCTGAAGGTTCGGGCGGAAGCAGCTTTAATAACAGTGTCGCCGATCAGGAGGCAGAACTGGAGACAGTAGCCAAAATCACTCATGAGAAGGGCAAGAAAAATGATAGTCAAAAGGCAAATGGGACTAGAGCATTCCAATTTCAGGATGTTTTCTCTCTAGAAAATGAAGAATCTGATGATGTTACGACGTTGATTGATAAAAAAGACAATGTATTTGTGATGTCAAACAAGAAATCAAAGTATCCAGTACTTCAAGTAGATTTGAGACTGATTTCAGACTTGGTTGTGGTTATTGTTTCTGCCGCAATTGGAGGAATTATCTTTTCTTGTTTAGGCCAACCGGTTATTGTGGGCTATCTTCTTGCGGGGTCAATTATTGGACCAGGAGGTCTAAAATTCATCAGTGAAATGGTGCAGGTTGAGACAGTGGCACAATTTGGTGTTGTATTTCTTCTTTTTGCTTTAGGACTGGAGTTTTCTTTGACAAAGTTAAAAGTTGTGGGGGCTGTTGCTGTTTTTGGAGGTTTTCTACAGATCATCATATTTATGTTCTTATGTGGCATAATTGCCATGTTAAGTGGAGCTAAATTGTCCGAGGGTGTATTTGTCGGTTCATTTCTATCAATGTCATCGACAGCAGTGGTGGTGAAGTTCTTGGTAGAACGGAATAGCAGTAATACTCTTCATGGTCAGGTTACTATTGGAACGCTTATCTTACAGGACTGTGCCGTTGGTTTGTTATTTGCCTTGCTCCCAGTTTTGGGTGGTCACAATGGTCTTATTTTAGGAATGATATCTATGGGAAAGTTGCTACTGGTGTTGTCAGTATATCTCACAGTCGCGTCCATTTTGTCGTGGTCATTTGTTCCCCGCTTTCTTAAGTTGATGATGCAGCTGTCGTCTCAAACAAATGAGTTGTATCAGCTTGCTGCTGTGGCATTTTGCTTGCTGTCTGCCTGGTGCAGTGATAAGTTGGGACTCAGTCTTGAGTTGGGTTCCTTTGTAGCTGGAGTTATGATATCTACCACCGACTTTGGTCAACATACTTTAGATCAGGTGGAACCAATTCGCAATTTATTTGCAGCTTTGTTCCTTTCGAGTATTGGAATGCTCATTCATGTACATTTTCTGTGGAGCCATTTGGATATTTTGCTAGCATCTGTCATGCTGGTTGTGTTTGTGAAGACAGCCGTTGTTACCGTTGTTGCAAAGGCATTTGGATACAGTATAAGGACTTCTTTTCAGGTTGGAGTCATGCTTGCTCAAATTGGAGAGTTTGCTTTTGTTCTCCTAAGCCGTGCCTCAAATCTTCATCTCATTGGGGGGAAAGTTTATCTGCTACTTCTTGGAACAACAGCACTTAGTCTAGTGACCACCCCTCTTGTGTTCAAATTGGTACCTGCTGTGCTGAATTTAGGGGTTCTCATGCATTGGTTCCCCTCTGAAAACATCATTCAAAGCGAGCGCGGCGGAGTCACCGTCATGAGGCTTGTGGTGCCTCTGCAAGGCGTTGTCCAAGGCCGTGGAGGTCTCTTGTTGGGCTCTCTCATTCCCTGTGCTCTCTTCTACTTCCTCCAACTTTATCTCAAGCGAAATCGTTCTCCCAACTCTGACTCCTCCTCGAATTCTCCGTCCCATTCTCACTCTTCCTCTAACCTCGTCGACCTCAACCGTTCGTCCTCTCGCTCTAATCTACTCACGCGCGGATCCGTTGGTCGAGTTCGGCTTTCTTCTCGAGCCAGTTCGATTGCGAAGCCCAATAACTGCCCCTACTATATTGGATTGGATCGCGTTCGGGAGGATCCTTACGATAGGTTGGATAATCCGAATGGGATTATTCAGCTTGGGTTGTCCGAGAATAGGTTGTGCTTTGATTTGCTTGAGAAATGGATATCGGAGAATTATACTGGTTCCGTTGGTGGAGGCAATAACGTCGAGTTGAATATTATGGGGATGGCAACTTACCAGCCTTTCGATGGATTGTGGGAGCTGAAAATGGCTATGGCAGGTTTCATGTCTCAGGTAATGGGTGGTGGAGTGGCTTTTGATCCATCACAATTATTGTTAACATCTGGTGCCACTGCCGCGGTTGAGGTACTCTGTTTCTGCTTAGCAGACCCTGGAAATGCATTTCTTATTCCAACTCCTTATTATCCTGGTTTTGATAGAGATGTGAAGTGGAGAACTGGAGTTGATTTAATACCAGTTCACTGTCGTAGTGCTGACAACTTTAACTTGAACATCACTGTACTAGAGCAAGCATACAATCAAGCTAGGAAACGAGGAATAAAAGTTCGGGGAGTTCTCTTATCTAACCCTGCAAATCCAGTTGGCAACATGTTGCCCCGAGAAATGCTATACAGTATTTTAGATTTTGCCCAAGAGAAGAATATCCACGTTGTATCCGATGAGATATTTGCAGGGTCAGTTTATGGAAACGACGAGTTTGTGAGCATGGCTGAAATGATTGATTCAGAAGATATTGACAAGAATAGAGTTCATATAGTGTATGGACTGTCGAAAGACCTCTCTCTTCCTGGCTTTAGAGTTGGTGTCATCTATTCACAAAATGAAAATGTTTTGGCTGCTGCTAGAAAAATGACAAGATTTTGCCCGATTTCCGCTCCAACCCAGCAGCTTGTTACCTTGATGCTTTCAGACAGAACCTTCGTTAATGAATACCTGGAGACAAGCAAAAAGAGAATTCGCGAGATGCATGTTCTTTTCGTGGCTGGTTTGAAACAGTTGGGAATTAAGTGTGCAAAGAGCAGTGCTGGTTTTTACTGCTGGGCTGATATGAGTGGACTGATGAATTCTTATAGTGAGAAAGGGGAGCTAGAATTATGGGAGAAGCTGCTGAATGTAGCTAAAATTAACGCGACTCCTGGATCTGCTTGTCATTGCATAGAACCTGGATGGTTTAGATGTTGTTTCACTACACTTTCACGAGAGGATTTATTGATCGTTATAGAACGGATTAGAAAAATGGCTGTTACGTGCAAATCTCCCAGTTGA 3246 43.31 MLHRFFMARRGGAIGSWLCIVLVLISAQIHVSARSDKEIRERFYGNLINSTAPISGDGSIAQMFDKVLEKEFPDNDLPEGSGGSSFNNSVADQEAELETVAKITHEKGKKNDSQKANGTRAFQFQDVFSLENEESDDVTTLIDKKDNVFVMSNKKSKYPVLQVDLRLISDLVVVIVSAAIGGIIFSCLGQPVIVGYLLAGSIIGPGGLKFISEMVQVETVAQFGVVFLLFALGLEFSLTKLKVVGAVAVFGGFLQIIIFMFLCGIIAMLSGAKLSEGVFVGSFLSMSSTAVVVKFLVERNSSNTLHGQVTIGTLILQDCAVGLLFALLPVLGGHNGLILGMISMGKLLLVLSVYLTVASILSWSFVPRFLKLMMQLSSQTNELYQLAAVAFCLLSAWCSDKLGLSLELGSFVAGVMISTTDFGQHTLDQVEPIRNLFAALFLSSIGMLIHVHFLWSHLDILLASVMLVVFVKTAVVTVVAKAFGYSIRTSFQVGVMLAQIGEFAFVLLSRASNLHLIGGKVYLLLLGTTALSLVTTPLVFKLVPAVLNLGVLMHWFPSENIIQSERGGVTVMRLVVPLQGVVQGRGGLLLGSLIPCALFYFLQLYLKRNRSPNSDSSSNSPSHSHSSSNLVDLNRSSSRSNLLTRGSVGRVRLSSRASSIAKPNNCPYYIGLDRVREDPYDRLDNPNGIIQLGLSENRLCFDLLEKWISENYTGSVGGGNNVELNIMGMATYQPFDGLWELKMAMAGFMSQVMGGGVAFDPSQLLLTSGATAAVEVLCFCLADPGNAFLIPTPYYPGFDRDVKWRTGVDLIPVHCRSADNFNLNITVLEQAYNQARKRGIKVRGVLLSNPANPVGNMLPREMLYSILDFAQEKNIHVVSDEIFAGSVYGNDEFVSMAEMIDSEDIDKNRVHIVYGLSKDLSLPGFRVGVIYSQNENVLAAARKMTRFCPISAPTQQLVTLMLSDRTFVNEYLETSKKRIREMHVLFVAGLKQLGIKCAKSSAGFYCWADMSGLMNSYSEKGELELWEKLLNVAKINATPGSACHCIEPGWFRCCFTTLSREDLLIVIERIRKMAVTCKSPS 1081
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
18 11067665 11078026 - Carg17224-RA Car18g01106 166808
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car18g01106 1081 Coils Coil 818 838 - -
Car18g01106 1081 MobiDBLite consensus disorder prediction 612 636 - -
Car18g01106 1081 Pfam Aminotransferase class I and II 690 1070 IPR004839 GO:0009058|GO:0030170
Car18g01106 1081 Pfam Sodium/hydrogen exchanger family 172 541 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
Car18g01106 1081 ProSitePatterns Aminotransferases class-I pyridoxal-phosphate attachment site. 915 928 IPR004838 GO:0003824|GO:0009058|GO:0030170
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car15g01067 Car18g01106 CCT
Car15g01067 Car18g01106 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car02g01278 Car-Chr2:8566857 Car18g01106 Car-Chr18:11067665 0 dispersed
Car10g00640 Car-Chr10:3253249 Car18g01106 Car-Chr18:11067665 0 dispersed
Car11g00567 Car-Chr11:3058523 Car18g01106 Car-Chr18:11067665 0 dispersed
Car12g00584 Car-Chr12:3897326 Car18g01106 Car-Chr18:11067665 5.67E-06 dispersed
Car12g00585 Car-Chr12:3902291 Car18g01106 Car-Chr18:11067665 2.80E-128 dispersed
Car14g01823 Car-Chr14:14184341 Car18g01106 Car-Chr18:11067665 7.01E-39 dispersed
Car18g01106 Car-Chr18:11067665 Car10g00630 Car-Chr10:3208188 3.44E-140 dispersed
Car19g00378 Car-Chr19:5601757 Car18g01106 Car-Chr18:11067665 4.05E-14 dispersed
Car15g01067 Car-Chr15:8386679 Car18g01106 Car-Chr18:11067665 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car18g01106 - - csv:101207607 986.097