Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car18g01109 ATGGCTCATACTCCTCTGCAATGGCTCTGTTTTCCTCTGTTTTTCCACTGTTTGCTTCTTTCAAGCGCCCAGTTTTTCAAAACCTATGTTGTTCAGATGGACAGGTCTGCAATGCCGGACTCGTTCTCCGATCATTTGGAGTGGTACTCCACTGTGGTAAGCAGTGTGGTGGTTGATAATCCTGAGAGAGAAGGTCAAGGTAATGGGGGAGGAGAAGACAGGATCATTTACAGTTATCAGAATGTTTTCCATGGAGTTGCAGCTCGATTGAGTGAAGAAGAGGCTGAGAGGCTCGAGGAAGAACATGGGGTGTTGGCCGTTTTTCCTGAGGTTAAGTATGAGCTTCATACGACTAGAAGCCCCAAGTTTCTTGGGCTTGAACCGGCGGACAGTAACAGCGCCTGGTCTCAACAAATTGCAGACCATGATGTGGTTGTCGGGGTTTTGGACACTGGGATTTGGCCGGAGAGTGAGAGCTTCAACGATGCTGGAATGTCGCCGGTGCCGGCGTATTGGAAAGGGGAATGCGAGACAGGGCGAGGCTTCACGAAACAGAATTGTAATAGAAAGATCGTTGGCGCTAGAGTGTTTTACCATGGGTATGAAGCTGCAACGGGGAAATTTAATCAACAGTTGGAGTATAAATCGCCGAGGGATCAAGATGGGCATGGGACTCACACGGCAGCCACCGTCGCCGGATCTCCGGTGGCAGGCGCAAATCTTCTGGGGTATGCTTATGGAACAGCTAGAGGAATGGCGCCTGGTGCTAGAATTGCCGCCTACAAAGTCTGTTGGGTTGGTGGCTGCTTCAGCTCCGACATTTTGTCGGCTGTGGACAGAGCTGTGGCCGACGGCGTAAATGTTCTGTCCATCTCTTTGGGAGGTGGGGTTTCTTCTTACTACCGTGATAGCCTCTCCGTTGCAGCATTTGGGGCAATGGAGATGGGTGTTTTTGTGTCGTGCTCGGCCGGCAATGGAGGGCCGGATCCTGTCAGTCTCACAAACGTATCGCCGTGGATAACCACCGTCGGCGCTAGTACAATGGACAGAGATTTCCCGGCCATTGTCAAGCTCGGCAATGGCAGAACAATCACCGGCGTGTCACTTTACAGAGGAAGAATCACGATTCAAGAAAACAAACAATTCCCAGTTGTGTATATGGGGAGTAATTCAAGCAACCCTGATCCGAGTTCTCTCTGTTTAGAAGGAACTTTAGATCCCCATTTCGTCGCCGGAAAAATTGTGATATGCGATCGAGGAATTAGCCCTCGGGTTCAAAAGGGAGTGGTGGTGAAAAACGCAGGTGGTATTGGGATGATTCTGTCGAACACGGCGGCGAATGGGGAAGAACTTGTTGCCGATTGCCATTTATTGCCGGCAGTCGCCGTCGGAGAAACAGAAGGCAAGGCAATTAAGCAATATGCATTAACAAATCGAAAACCGACGGCGACTCTAGGGCTTTTAGGTACAAGATTAGGGGTAAAACCCTCGCCGGTAGTGGCGGCGTTTTCTTCCAGAGGACCAAATTTCCTCACTCTGGAGATTCTCAAGCCCGATCTGGTAGCTCCCGGCGTCAACATCCTCGCCGCTTGGACCGGAAAAACAGGGCCATCGAGCTTGACAACAGATACAAGAAGGGTGAAATTCAACATTCTTTCCGGAACTTCAATGTCGTGCCCACACGTCAGTGGAGTAGCGGCTTTAATCAAATCGAAACATCCCGATTGGAGCCCATCAGCGATCAAATCGGCGCTGATGACCACCGCATATGTCCACGACAACACCTACAAGCCTCTCAAAGACGCCTCCGCCGCATCCCCGTCGAGTCCGTACGACCATGGCGCCGGCCACATAAATCCCAGAAAAGCCCTAGATCCTGGTTTGGTTTACGAAATTAAACCGCAAGATTACTTCGAATTCCTCTGTACACAGGATTTAACTCCTTCACAGCTCAAAGTCTTCTCCAAACATTCAAATCGATCATGCCATCGCCTTCTCCCCAACCCTGGAGATTTGAATTATCCAGCCATCTCCGCCGTATTCCCAGAGAAAACCACCATCACCTCCCTGACCCTTCATAGAACCGTCACCAACGTCGGCCCTGCATCCTCGAGTTACCACGCGATAGTGTCTCCGTTCACCGGCGCCGCCGTGAAAATCGAACCGGAGAGGCTGAACTTCACAAGGAGATATCAGAAGCTTTCATACAGAATCACTTTCGTGACGAAGAAGAGACTTAGCATGCCGGAATTTGGCGGGCTAATTTGGAAGGACGGAAGTCACAGGCTGCCCGTAGAATTAGAGTTGCCCGAGAGTCTCTCTTTTGTTCCTGGGTGGGAGGAAGAAACGAAGCGACACGTTTTCTTCTCAGCGAAATTCCTTAACGCATTCCATTACTTACTTATATTATTACACTTCGCCAACGATGATAATTCTTATCGGGAGATTATCGACGGCGAGTTCCTGTTTCGGACGATTCCGATGACGGAGGTTTACTGTAGAATGCCAAGTGATGATGATATAGATTCGCCGGCCAAATGCCGAGAGCGCCGGCGCCGTAGAATAGAAATGAGGCGATTAGCAGCAGTACCGTCGGCGAAACCCTCGCCATCGCCGTCGACCAGTCACCACCACCGGAAGGAGAACCAAACTGAGAGTTCCGGTTTGGAGAAGAAGCGTGTTCGGAAGACGGACGGCGGCGACACTCCGGAGGTTTTAACGTCTTCGTCTTCAGGGGAGGACGTGAACGCTGTAGTTGCTTCATCGTTGGTACCTCAGCCGGTGTTCGGGATGATGTCGGTATCTGGGAGATCACGTGAGATGGAGGACGCAGTATCGGTGAGCACGTGCCTTATTGGTCCAGAAAGGCGACTACCGGTGCATTTCTTCGCCGTCTATGATGGACATGGAGGCCCTCACGTGGCAACGCTATGTATGGAGAAGATGCACGTGTTAGTACAGGAGGAATTAGCGCGCGTGGTGAATACGCGCGAGGAAACTGAGAGTATCGGTGGAGGAAGTAGCGCGGCGGAGGAGGAGGCGACTTGGAGAAGAGTGATGCGGCGGAGCTTTGAGAGAATGGATGAAGTGGCACTCAATACTTGTGCCTGTGGGAGCGTCGGAGGCCAGTGTGCTTGCCATCCAATGGAGGTGGCTCTCGGTGGCTCCACCGCCGTTGTCGCTGTGCTCACGCCGGAACATATAATCGTTGCCAACTGCGGTGACTCACGCGCCGTCCTCTGTCGAGGAGGAAGGGCCATTCCGCTTTCCAATGATCACAAGGGCTATGAATTCGTCATAGTTATGTTATGGATGGCGATCCTGACGTTCTATAGTTATTTATACGACACTTGTTGCGCGACTGGGGCTATGGGGATCAGTTCTTCGATCTCGCCTGATAGAATTGATGAACTAGCAAGGATCGAAGCTGCAGGAGGGCAGGTGATTTTCATAAATGGAGCTCGGGTTAAAGGCATCCTTGCAATGTCCCGTGCAATTGGCGACAAATATCTCAAGTCAGTTGTAATATCAGAGCCAGAAATTACCTTCACCAAAAGAGAACCCGATGATGAATGTTTAATACTTGCAAGTGATGGTTTGTGGGATGTTCTTTCAAGTGAGTTGGCTTGTGAGGTAGCTCGTGAATGTCTCCAGGAAACGGTCGCTGCTTCTAGCACTACAATAGATCTCAACGCCTTGCCTCAAATTGAAGAAGGGGCTGGAACTTCATATACCTCTCGTAGTTCAGTTGCTGCAGCACTGCTTACTCGTCTTGCTTTGGGGCGGAAAAGCACCGACAATATCAGTGTCATAGTTATCGATCTAAAGAGGAGCTAA 3837 50.72 MAHTPLQWLCFPLFFHCLLLSSAQFFKTYVVQMDRSAMPDSFSDHLEWYSTVVSSVVVDNPEREGQGNGGGEDRIIYSYQNVFHGVAARLSEEEAERLEEEHGVLAVFPEVKYELHTTRSPKFLGLEPADSNSAWSQQIADHDVVVGVLDTGIWPESESFNDAGMSPVPAYWKGECETGRGFTKQNCNRKIVGARVFYHGYEAATGKFNQQLEYKSPRDQDGHGTHTAATVAGSPVAGANLLGYAYGTARGMAPGARIAAYKVCWVGGCFSSDILSAVDRAVADGVNVLSISLGGGVSSYYRDSLSVAAFGAMEMGVFVSCSAGNGGPDPVSLTNVSPWITTVGASTMDRDFPAIVKLGNGRTITGVSLYRGRITIQENKQFPVVYMGSNSSNPDPSSLCLEGTLDPHFVAGKIVICDRGISPRVQKGVVVKNAGGIGMILSNTAANGEELVADCHLLPAVAVGETEGKAIKQYALTNRKPTATLGLLGTRLGVKPSPVVAAFSSRGPNFLTLEILKPDLVAPGVNILAAWTGKTGPSSLTTDTRRVKFNILSGTSMSCPHVSGVAALIKSKHPDWSPSAIKSALMTTAYVHDNTYKPLKDASAASPSSPYDHGAGHINPRKALDPGLVYEIKPQDYFEFLCTQDLTPSQLKVFSKHSNRSCHRLLPNPGDLNYPAISAVFPEKTTITSLTLHRTVTNVGPASSSYHAIVSPFTGAAVKIEPERLNFTRRYQKLSYRITFVTKKRLSMPEFGGLIWKDGSHRLPVELELPESLSFVPGWEEETKRHVFFSAKFLNAFHYLLILLHFANDDNSYREIIDGEFLFRTIPMTEVYCRMPSDDDIDSPAKCRERRRRRIEMRRLAAVPSAKPSPSPSTSHHHRKENQTESSGLEKKRVRKTDGGDTPEVLTSSSSGEDVNAVVASSLVPQPVFGMMSVSGRSREMEDAVSVSTCLIGPERRLPVHFFAVYDGHGGPHVATLCMEKMHVLVQEELARVVNTREETESIGGGSSAAEEEATWRRVMRRSFERMDEVALNTCACGSVGGQCACHPMEVALGGSTAVVAVLTPEHIIVANCGDSRAVLCRGGRAIPLSNDHKGYEFVIVMLWMAILTFYSYLYDTCCATGAMGISSSISPDRIDELARIEAAGGQVIFINGARVKGILAMSRAIGDKYLKSVVISEPEITFTKREPDDECLILASDGLWDVLSSELACEVARECLQETVAASSTTIDLNALPQIEEGAGTSYTSRSSVAAALLTRLALGRKSTDNISVIVIDLKRS 1278
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
18 11090735 11101405 + Carg17221-RA Car18g01109 166811
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car18g01109 1278 Pfam Peptidase inhibitor I9 28 116 IPR010259 -
Car18g01109 1278 Pfam Subtilase family 142 595 IPR000209 GO:0006508|GO:0008236
Car18g01109 1278 Pfam PA domain 383 471 IPR003137 -
Car18g01109 1278 ProSitePatterns PPM-type phosphatase domain signature. 962 970 IPR000222 GO:0043169
Car18g01109 1278 ProSiteProfiles PPM-type phosphatase domain profile. 928 1275 IPR001932 -
Car18g01109 1278 MobiDBLite consensus disorder prediction 874 900 - -
Car18g01109 1278 Pfam Protein phosphatase 2C 1131 1221 IPR001932 -
Car18g01109 1278 Pfam Protein phosphatase 2C 929 1096 IPR001932 -
Car18g01109 1278 ProSitePatterns Serine proteases, subtilase family, serine active site. 554 564 IPR023828 -
Car18g01109 1278 MobiDBLite consensus disorder prediction 858 913 - -
Car18g01109 1278 ProSiteProfiles Serine proteases, subtilase domain profile. 112 624 - -
Car18g01109 1278 Pfam Fibronectin type-III domain 671 762 IPR041469 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car16g00143 Car18g01109 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car18g01109 Car-Chr18:11090735 Car20g00658 Car-Chr20:3717241 0 dispersed
Car16g00144 Car-Chr16:827976 Car18g01109 Car-Chr18:11090735 0 transposed
Car16g00143 Car-Chr16:821371 Car18g01109 Car-Chr18:11090735 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car18g01109 - - csv:101214825 1368.99