Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Car18g01118 | ATGGCTAAAAATGCGACAGTCTTGTTTCTAATGATGATTGTTTGTGTGTCGGAAGCAGTTCTTGATACCAATTATTACTCTAAAACATGTCCCAATGCCGAGAAAATCATCCTCCAAACCGTCTACAATGCTTCCATTCATGACCCGAAAGTCCCTGCTCGTCTTCTCAGACTCTTCTTCCACGACTGTTTCATAAGGGGATGCGATGCATCGGTGCTGATAGATTCAATGCCAGGGAATCAGGCAGAGAAAGATGCACCTCCAAACATCTCGCTAAGGTCGTTTTATGTGATCGACGAGGCAAAATCCAAGCTTGAAACTGCTTGCCCACATTCTGTTTCTTGTGCTGATATTGTCGCCATTGCTGCTAGAGATGTCGTTACTCTGTCTGGGGGGCCATATTGGAGTGTACTCAAAGGAAGGAAAGATGGGAAGATTTCCAATGCTTCTGAAACCATCAACTTACCAGCTCCAACTTTCAATGTATCTCAACTAATCCAGAGCTTTGCAAACAGAGGATTGCAAGTTAAAGACTTGGTTGCTCTATCCGGGGCTCATACGCTTGGGTTCTCCCACTGTTCTTCCTTTCAATCTAGACTTCGCAACTTTAGCTCGATTCATGATACTGATCCAACTTTGGAATCTGGGTTTGCTCAAATTCTGAAAAACAAATGTCCAAAACCAAATTTGGACAAAAATGCAGGACAGTTCTTGGACCCAACTTCCTCAACTTTTGACAATGTGTATTACAAGAGACTGTTGGAAGGGAAGGGTGTGTTTGGTTCGGATCAATCTCTGTTTGGTGATTCAAGGACTAAAACGATTGTTGAATCGTTTGCTAATGATCAGAACTTGTTCTTTAAGGAATTTGCAGCTTCAATGGTGAAATTGGGTAATGTTGGGGTTATTGAAAATGGCAATGTCAGGTTCAATTGCAGGGTGGTGAACTGA | 951 | 42.48 | MAKNATVLFLMMIVCVSEAVLDTNYYSKTCPNAEKIILQTVYNASIHDPKVPARLLRLFFHDCFIRGCDASVLIDSMPGNQAEKDAPPNISLRSFYVIDEAKSKLETACPHSVSCADIVAIAARDVVTLSGGPYWSVLKGRKDGKISNASETINLPAPTFNVSQLIQSFANRGLQVKDLVALSGAHTLGFSHCSSFQSRLRNFSSIHDTDPTLESGFAQILKNKCPKPNLDKNAGQFLDPTSSTFDNVYYKRLLEGKGVFGSDQSLFGDSRTKTIVESFANDQNLFFKEFAASMVKLGNVGVIENGNVRFNCRVVN | 316 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 18 | 11187680 | 11188808 | - | Carg26808-RA | Car18g01118 | 166820 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Car18g01118 | 316 | Pfam | Peroxidase | 44 | 282 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
| Car18g01118 | 316 | ProSitePatterns | Peroxidases proximal heme-ligand signature. | 178 | 188 | IPR019793 | - | |
| Car18g01118 | 316 | ProSiteProfiles | Plant heme peroxidase family profile. | 20 | 316 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Car03g00013 | Car-Chr3:161053 | Car18g01118 | Car-Chr18:11187680 | 2.11E-93 | dispersed | |
| Car03g00608 | Car-Chr3:5637620 | Car18g01118 | Car-Chr18:11187680 | 4.55E-119 | dispersed | |
| Car07g00357 | Car-Chr7:1801617 | Car18g01118 | Car-Chr18:11187680 | 8.28E-120 | dispersed | |
| Car08g01073 | Car-Chr8:7309057 | Car18g01118 | Car-Chr18:11187680 | 1.71E-88 | dispersed | |
| Car09g00341 | Car-Chr9:1886758 | Car18g01118 | Car-Chr18:11187680 | 7.51E-82 | dispersed | |
| Car18g01118 | Car-Chr18:11187680 | Car20g00854 | Car-Chr20:6624753 | 2.89E-87 | dispersed | |
| Car18g01118 | Car-Chr18:11187680 | Car12g00372 | Car-Chr12:2373390 | 3.54E-125 | transposed |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Car18g01118 | K00430 | - | csv:101210306 | 560.836 |