Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car18g01131 ATGGCATCTTCTCGTTTGGCTGGAGGATTAGCGCAGTCTTCATCGAGTTCTGGGATTTTCTACCAAGGAGAAGGGCAGTCTTCAGCTATTGTTAATTCCCACTTGAGCCAATCATTTGCAAATTCATCGAGTTCAATTCCAGGAACTGGATGTTCTGATTTTGGTCCAGTTTCCGGAGACATGAATAATGCAGTTTTAAATAGTGTGGCAAATTCAGGACCCAGTGTGGGTGCAAGTTCATTGGTTACTGATGCAAACTCTTCGCTTTCAGGAGGGCCACATTTGCAAAGGAGTGCAAGCATCAATACGGAGTCATACATGCGCTTGCCTGCGTCGCCTATGTCATTCAATTCAAATAACATTAGTGTGTCCGGTTCCTCAGTTATAGATGGATCCTGCGTGGTGCAGCAAAATTCTCAACAGGACCAAAATGTCCTACACATTCAGCAACAGGCACAGCAAGGTGCTTCACATGCCACATCTTTACCAACATCACAAATAGGCCAAGTACCACTTCCCCTGGGTGCAAAATTTCAGGGGTCTTTCATTCCAGATCCAAATAATTATTCTCAGATGCAGAAGAAACCACGACTGGATATAAAGCAGGAAGATGTGCTGCAACAGCAAGTTTTGCAGCAGCTATTTCAGAGACAGGATTCCATGCATTCACAAAACAGTAACTCGCAGTTACAAGCTTTATTTCAACAACAAAGAATGCGACAACAGCAACAGATTTTGCAGTCTCTACCTCAGTACAGAGCTCAGTTTCAGCAGCAGCAGCAACAGATACAGTTGAGGCAGCAGTTGCAACAACCGCAGGCAATGCAGCCAGTATCACCCATGAAGCGCCCATTTGATGGTGGTGTTTGTTCTCGTCGGATGATGCAATATTTATATCATCAGCGGCAAAGGCCTCCTGAGAATAGTATAGCCTACTGGAGAAAGTTTGTGGCAGAGTATTACTCTCCTCGTGCGAAGAAAAGATGGTGCTTGTCATTGTACGAGAATGTTGGCCACCATGCTCTTGGTGTGTTTCCCCAGGCAGCTATGGTCAGTTCATACATTTGCGATATTTTTTGTTAA 1083 44.6 MASSRLAGGLAQSSSSSGIFYQGEGQSSAIVNSHLSQSFANSSSSIPGTGCSDFGPVSGDMNNAVLNSVANSGPSVGASSLVTDANSSLSGGPHLQRSASINTESYMRLPASPMSFNSNNISVSGSSVIDGSCVVQQNSQQDQNVLHIQQQAQQGASHATSLPTSQIGQVPLPLGAKFQGSFIPDPNNYSQMQKKPRLDIKQEDVLQQQVLQQLFQRQDSMHSQNSNSQLQALFQQQRMRQQQQILQSLPQYRAQFQQQQQQIQLRQQLQQPQAMQPVSPMKRPFDGGVCSRRMMQYLYHQRQRPPENSIAYWRKFVAEYYSPRAKKRWCLSLYENVGHHALGVFPQAAMVSSYICDIFC 360
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
18 11251224 11253534 + Carg26821-RA Car18g01131 166833
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car18g01131 360 Pfam LIM-domain binding protein 293 333 IPR029005 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car15g01273 Car18g01131 CCT
Car15g01273 Car18g01131 ECH
Car16g00126 Car18g01131 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car16g00126 Car-Chr16:731820 Car18g01131 Car-Chr18:11251224 1.14E-178 wgd
Car18g01131 Car-Chr18:11251224 Car02g00788 Car-Chr2:5733095 6.04E-130 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car18g01131 - - csv:105434391 504.212