Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car18g01158 ATGAATCCAACCGCCTTCGGAGCTCCATTCCTAGCAGTTCTGTTTCTCCTTGCTGCAGCGCTACGGTCACAACCGCTCGCCGGAGAACGGCTTCAGGTGGCGATGACGGTGGTTAGAAATGCCTCTTCCGTCGGAGCCTTTTGTTTGGACGGAAGCTTGCCGGCGTACCACCTCGACAGGGGATTCGGCGCCGGAGCCGGAAACTGGCTTCTACAGTTCGAGGGAGGTGGGTGGTGCAATGACGTGGAGTCCTGTTTGGAGAGAGCCAAGAGCCGTAGAGGTTCAACTCAGCTGATGAACAAATGGGAAGACTTCAATGGTATTCTCAGCAATAATGCTTCTCTTAATCCAGATTTTTATAACTGGAACCGTGTGAAGCTGAGGTACTGTGACGGAGGCTCATTTGGAGGAGATGCATTGTTCCACAACGGGACATCGCCGCTTTATTTCAAAGGCCAAAAGATATGGGAATCCATCCTTCTTGACCTTCTACCAAAAGGGTTGGGGACAGCAAATAAGGCTTTGCTTTCTGGATGCTCAGCTGGAGGTCTAGCAACGTTTCTGCACTGTGAAGATTTCACCAACTATTTACCAAGAAACGCCACTGTCAAATGCTTGAGTGATGCTGGATTTTTTCTTGACTTACAAGACATTGGTTCAACACACACCATGAGGGGCTTCTTTAAGGATCTTGTGGCTCTCCAGGGAATGAACCCAAATCTGAATGGAAACTGCACAGCCTCTTCTAACCTTCCAGATTTGTGCATATTCCCACAGTATGCCTTGAAGTACATAGCCACACCGTTTTTCATTCTGAATTCAGCTTATGATGTTTACCAATTTCATCATGGATTGGTGCCGCCATCTGCTGATATACATGGACGATGGAAACACTGCAAAATGAATCCAGCAGCCTGTAGTAAGCAACAGATTGAGCAGCTGCAAGGAGGAATGTTCATAAATTCATGTTTTGCTCATTGCCAAAGTGAGTCACAAAACACATGGTTTGCAAAGGGCTCCCCAACAATTGACAACAAGACTATAGCAGGAACAGTTGGAGATTGGTACTTCAACAGAAGGAACATAAAGGAGATTGATTGTGCTTATCCATGCGACTCTACTTGCCATAATCTTATACCATAA 1143 46.54 MNPTAFGAPFLAVLFLLAAALRSQPLAGERLQVAMTVVRNASSVGAFCLDGSLPAYHLDRGFGAGAGNWLLQFEGGGWCNDVESCLERAKSRRGSTQLMNKWEDFNGILSNNASLNPDFYNWNRVKLRYCDGGSFGGDALFHNGTSPLYFKGQKIWESILLDLLPKGLGTANKALLSGCSAGGLATFLHCEDFTNYLPRNATVKCLSDAGFFLDLQDIGSTHTMRGFFKDLVALQGMNPNLNGNCTASSNLPDLCIFPQYALKYIATPFFILNSAYDVYQFHHGLVPPSADIHGRWKHCKMNPAACSKQQIEQLQGGMFINSCFAHCQSESQNTWFAKGSPTIDNKTIAGTVGDWYFNRRNIKEIDCAYPCDSTCHNLIP 380
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
18 11375645 11379543 - Carg22106-RA Car18g01158 166860
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car18g01158 380 Pfam Pectinacetylesterase 29 360 IPR004963 GO:0016787
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car16g00111 Car18g01158 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car16g00460 Car-Chr16:2922427 Car18g01158 Car-Chr18:11375645 2.56E-124 dispersed
Car16g00111 Car-Chr16:670951 Car18g01158 Car-Chr18:11375645 4.69E-177 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car18g01158 K19882 - csv:101216160 654.44