Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car18g01166 ATGCCTTCGTGGTGGGGGAAGCCATCATCCAAAGAAGTAAAGAAGAAAACAAGCAAGGAAAGTTTCATTGACTCATTACACCGTAAGTTCAAGAATTCACCTGAAGGTAAAGTAAACAGCCGATCAGGAAGTTCTTGTAGACGTGGTGGTGACACTATATCTGAGAAATCACCTCTATCAAGATCACCATCACCTTCCAAAGAAGTATCGAGATGTCAAAGTTTTGCTGGAAGATCACATTCTCACCAACTGCCCCTTCCAGAACTGCACCCTATAGGTATAGGTCCCACAGACTCTGGGATTAGTGTGACGGCAAAATCAAAATTAGAGAGAAGCTCTAAGACATCTTCATTCCTACCACTCCCTAGACCTGCATGTATCCGGAGGAGGCCGGATCCTGCAGATTTGGATGGAGATTTAGTCACTGGTTCAGTCTCTGGTGAGTCCTCAAGTGATAGTGATGATCCCATTGATTCACGTCAACGTAGTCCTCAGGCAACTGACTATGACGTTGGGACTAGAACTGTGGTAGGTTCTATTGAACCTAGTGCAACTCTCAAGGACCAGTCTTCTACTGTTGTGCAAACAAATTTAAAAGAGGGCAAGAAAGCGGAAAGTCTTTCATTTCCTCATAAGAAGCCTTCAATACCTAAACGGAGGCCTTTAAGCAGCAATGTAACAAATCTTCAAGTTCCTCGTCATGGGGCATTCTTTAGCGCTCCAGATAGTTCCATGTCTAGTCCTTCTAGAAGTCCTATGAGGGTATTTAGCACAGAGCAAGTCATGAACACTGCTGTTTGGTCTGGAAAGTCTCACTCAGATGTCATTTTAGGTGGCTCTGGCCACTGCTCCAGTCCTGGTTCTGGACACAATTCAGGGCACAACTCTATGGGAGGTGATATGGCAGCCCACTTCTTTTGGCAACAAAGTAGGGGCAGCCCCGAATATTCTCCAGTACCTAGTTCTAGAATGACTAGTCCCGGCCCAAGCTCCAGAATTCAAAGTGGTGCTGTTACACCTATTCATCCTAGAGCAGGAGCTCCGCCTGCTGAATCACAAACTTGCTGGCCTGATGAGAAACAAACTCATCGTTTGCCTCTTCCTCCCATTGCAATCTCAAACTCTTCTCCATTTTCTCATTCAAACTCTGCAGTGACATCTCCTTCAGTGCCTAGGAGTCCTGGAAGGACAGAGACTCCAGCAAGCCCAGGTTCACGCTGGAAAAAGGGGAAGCTACTGGGTCGTGGCACATTTGGGCATGTGTATGTTGGTTTTAATAGCGAAAGTGGAGAAATGTGTGCAATGAAGGAGGTCACCTTATTTTCTGATGATGCAAAGTCTAAGGAAAGTGCTAAACAATTAATGCAGGAAATTGCTTTACTGAGTCGTTTACGGCATCCCAACATTGTGCAATATTATGGTTCAGAATCAGTGGGTGATAAACTCTATATTTATCTGGAATATGTATCTGGTGGCTCCATTTATAAATTACTACAAGAGTATGGACAATTTGGGGAACTAGCAATTCGTAGCTATACTCAACAAATACTATCAGGACTTGCATATTTGCATGCTAAAACTACAGTGCACAGGGACATTAAAGGAGCAAACATACTTGTTGACCCTAATGGCCGTGTTAAATTGGCAGACTTTGGGATGGCGAAGCATATCACAGGCCAATCATGTCCACTGTCGTTTAAGGGCAGCCCTTACTGGATGGCACCTGAGGTCATAAAGAACTCAAATGGTTGCAACCTTGCCGTTGATATTTGGAGTCTTGGATGCACTGTTCTGGAGATGGCAACTACAAAGCCACCTTGGAGCCAGTATGAAGGGGTTGCTGCGATGTTTAAGATTGGCAATAGCAAAGAACTCCCAGTAATTCCAGAGCACCTCTCAGATGATGGGAAGGATTTTGTGAGACTATGTCTGCAACGGAACCCGTATCATCGACCTACAGCTGCTCGACTTTTGGATCATCCTTTTGTCAAATATGCTGCACCTGTAGAGAGGCCTATTTTGAGCTCTGAACCCTCTGATGCAACTCCTGGGGTTACAAACGGAGTGAAGACTTTGGGTATTGGCCAATCACGTATTACTTCTGTGGACTCGGATAGTAGACTCGCAGTTCATTCTTTAAGAGTCTCAAAACCTGTTCTTCATGCCAGTGACATCAACATTCTCAGAAACATCTCATGTCCTGTTTCACCAATTGGAAGCCCCCTTTTACGCTCACGATCACCTCAACATCCCAGTGGAAGAATGTCTCCTTCACCGATATCAAGTCCAAGAACTACTTCAGGCTCGTCGACACCTTTGACAGCATGTGGTGGTGCTATTCCTTACAACCACCTGAAACAAGCTATATACCTGCAGGAGGGATTTGGAAGCATGCCAAAGTCCTTAAATAATAGTCCATACAGCAGTGGTCTCTCGTTCCATGATTCAAATCCCGATATTTTTCGAGGGTTGCAGCCTGGGGCTCCCATCTTCTCTGAAATGATACCAGAAAATGATATCCTGGGCAAACAGGTTGGAGTCGGAAGACCTGCTTATGGTGAACTGTATGATGGACAGCAGGTCTTGGCTGATCGAGTGTCTCGACAGCTCCTGAGGGATCATGTTAAAACAAACCCTTCTCTTGATTTGAGTCCTAGCACTACCTTGTCTGGCCGCATGAATGGTATCTAA 2691 45.15 MPSWWGKPSSKEVKKKTSKESFIDSLHRKFKNSPEGKVNSRSGSSCRRGGDTISEKSPLSRSPSPSKEVSRCQSFAGRSHSHQLPLPELHPIGIGPTDSGISVTAKSKLERSSKTSSFLPLPRPACIRRRPDPADLDGDLVTGSVSGESSSDSDDPIDSRQRSPQATDYDVGTRTVVGSIEPSATLKDQSSTVVQTNLKEGKKAESLSFPHKKPSIPKRRPLSSNVTNLQVPRHGAFFSAPDSSMSSPSRSPMRVFSTEQVMNTAVWSGKSHSDVILGGSGHCSSPGSGHNSGHNSMGGDMAAHFFWQQSRGSPEYSPVPSSRMTSPGPSSRIQSGAVTPIHPRAGAPPAESQTCWPDEKQTHRLPLPPIAISNSSPFSHSNSAVTSPSVPRSPGRTETPASPGSRWKKGKLLGRGTFGHVYVGFNSESGEMCAMKEVTLFSDDAKSKESAKQLMQEIALLSRLRHPNIVQYYGSESVGDKLYIYLEYVSGGSIYKLLQEYGQFGELAIRSYTQQILSGLAYLHAKTTVHRDIKGANILVDPNGRVKLADFGMAKHITGQSCPLSFKGSPYWMAPEVIKNSNGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPVIPEHLSDDGKDFVRLCLQRNPYHRPTAARLLDHPFVKYAAPVERPILSSEPSDATPGVTNGVKTLGIGQSRITSVDSDSRLAVHSLRVSKPVLHASDINILRNISCPVSPIGSPLLRSRSPQHPSGRMSPSPISSPRTTSGSSTPLTACGGAIPYNHLKQAIYLQEGFGSMPKSLNNSPYSSGLSFHDSNPDIFRGLQPGAPIFSEMIPENDILGKQVGVGRPAYGELYDGQQVLADRVSRQLLRDHVKTNPSLDLSPSTTLSGRMNGI 896
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
18 11408514 11414670 - Carg22114-RA Car18g01166 166868
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car18g01166 896 MobiDBLite consensus disorder prediction 368 400 - -
Car18g01166 896 MobiDBLite consensus disorder prediction 740 774 - -
Car18g01166 896 MobiDBLite consensus disorder prediction 199 225 - -
Car18g01166 896 MobiDBLite consensus disorder prediction 311 337 - -
Car18g01166 896 MobiDBLite consensus disorder prediction 36 80 - -
Car18g01166 896 MobiDBLite consensus disorder prediction 877 896 - -
Car18g01166 896 MobiDBLite consensus disorder prediction 742 774 - -
Car18g01166 896 MobiDBLite consensus disorder prediction 100 119 - -
Car18g01166 896 Pfam Protein kinase domain 408 663 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car18g01166 896 ProSitePatterns Protein kinases ATP-binding region signature. 413 436 IPR017441 GO:0005524
Car18g01166 896 MobiDBLite consensus disorder prediction 311 409 - -
Car18g01166 896 MobiDBLite consensus disorder prediction 879 896 - -
Car18g01166 896 MobiDBLite consensus disorder prediction 9 35 - -
Car18g01166 896 ProSiteProfiles Protein kinase domain profile. 407 663 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car18g01166 896 MobiDBLite consensus disorder prediction 1 172 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car16g00103 Car18g01166 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car03g00988 Car-Chr3:7617163 Car18g01166 Car-Chr18:11408514 6.67E-144 dispersed
Car07g00707 Car-Chr7:3640237 Car18g01166 Car-Chr18:11408514 1.77E-112 dispersed
Car07g00791 Car-Chr7:4161278 Car18g01166 Car-Chr18:11408514 3.94E-142 dispersed
Car16g00103 Car-Chr16:632279 Car18g01166 Car-Chr18:11408514 0 wgd
Car18g01166 Car-Chr18:11408514 Car02g00816 Car-Chr2:5902584 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
89548 PF00069 Pkinase 3.20E-70 CL0016 Car PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car18g01166 K20717 - csv:101214961 1523.45