Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car18g01219 ATGGTATGCAGCTACAATATCAGGAATGTGATTTCTTGGGCTGGACATGTAGGAATAATCAACCGAAGGGTTCAAATCAACAATATCTGGAGGAGCTTGCCTTCAAATCTTGGATTTGTTCACACCTGGAAGCGTGAATATAGAACGAGTCTCATGATGATGGTCGATACAGGTGCATCAGAAAATCGCAGGCCGGTTGTTGATAAGCATCCAGAGAAAAATGAAGATGGTGGCTATGCCAGTGGAGGGTGGAAAAGTGACGATGGGAAACTTAGTTGGGGGTATTCAAGTATCAGGGGGAAGAGGGCAACCATGGAAGATTTCTTCGATATTAAAATGTCGAAGGTTGATGGTCAAACGGTTTGCCTTTTTGGCATCTTTGATGGCCATGGTGGATCTCGTGCCGCAGAGTTTTTGAAAGACCATCTCTTCGAGAATCTGATGAAGCACCCAAAGTTTTTGATGGATACCAAAGTAGCTATCAGTGAAACATATCAACGGACTGATGCTGAATTTTTAAGTTTGGAAAAAGAAACTTCAAGGGACGATGGCTCCACTGCTTCAACAGCTTTGCTAGTTGGCAATCATCTCTATGTTGCCAATGTTGGCGATTCGCGTGCTATAATATCAAAAGGGGGTGAAGCAATCCCTCTTTCTGAGGACCACAAACCAAATAGAACTGACGAGCGGCGGAGAATTGAAAAGGCCGGGGGTGTTGTCATGTGGGCTGGCACTTGGAGGGTAGGAGGTGTGTTAGCAATGTCCCGCGCTTTTGGTAACAAGATGTTGAAGCAGTTTGTTGTTGCAGATCCTGATATTCAGGTGTCCTTGTCATGGTTTACTAAAACTGCCCACCATACTCACCAGGATCTTGAAGTAGACAAGGACGTCGAGTTGCTTATTCTCGCAAGCGATGGTCTTTGGGATGTGGTACGCAACGAGGATGCAGTACTAGTTGCAGGGAAGGAAGAAGAACCCGAGGCAGCTGCTCGGAAGCTAACCGAAGCAGCATTTACCCGTGGTAGCGCTGACAATATAACATGCATTGTGGTGAAGTTTCATCATGATGATGCAGGTCCTGCTGCCGAAACTCAAGAAATCGACTAA 1107 45.71 MVCSYNIRNVISWAGHVGIINRRVQINNIWRSLPSNLGFVHTWKREYRTSLMMMVDTGASENRRPVVDKHPEKNEDGGYASGGWKSDDGKLSWGYSSIRGKRATMEDFFDIKMSKVDGQTVCLFGIFDGHGGSRAAEFLKDHLFENLMKHPKFLMDTKVAISETYQRTDAEFLSLEKETSRDDGSTASTALLVGNHLYVANVGDSRAIISKGGEAIPLSEDHKPNRTDERRRIEKAGGVVMWAGTWRVGGVLAMSRAFGNKMLKQFVVADPDIQVSLSWFTKTAHHTHQDLEVDKDVELLILASDGLWDVVRNEDAVLVAGKEEEPEAAARKLTEAAFTRGSADNITCIVVKFHHDDAGPAAETQEID 368
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
18 11737181 11740906 - Carg20351-RA Car18g01219 166921
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car18g01219 368 MobiDBLite consensus disorder prediction 62 83 - -
Car18g01219 368 ProSitePatterns PPM-type phosphatase domain signature. 123 131 IPR000222 GO:0043169
Car18g01219 368 Pfam Protein phosphatase 2C 96 346 IPR001932 -
Car18g01219 368 MobiDBLite consensus disorder prediction 62 76 - -
Car18g01219 368 ProSiteProfiles PPM-type phosphatase domain profile. 92 353 IPR001932 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car16g00219 Car-Chr16:1235974 Car18g01219 Car-Chr18:11737181 1.46E-56 dispersed
Car18g01219 Car-Chr18:11737181 Car09g00489 Car-Chr9:2729001 2.47E-55 dispersed
Car16g00058 Car-Chr16:387816 Car18g01219 Car-Chr18:11737181 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car18g01219 K17506 - csv:101203681 654.055