Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car18g01221 ATGAATTCAGCTCTCCTCAGAGGGTTGGCATCTAGTTCTCATGGAATTAGAGGAATTGAGAAGTCATTGAAATCTTCTTCTTGTAATAATCTCATGCCTCAAGGCTTGCGCTCCGGGAAGAGAATTCTTGATCCACAAGGGCCTTTTCTTCAAAGTTGGAACAAGATATTTGTGCTGTCTTGTGTTGTTGCTGTTTCATTGGATCCTCTGTTCTTTTATGTTCCTGTGATTGATAATAGAAACAAGTGTCTTAGGTTAGATGAGAAAGTGGAGACTGTAGCCTGTATATTGCGATTGTTTACAGATTTATTCTATGTCGTGCATATCGTTTTTCAGTTTCGTACAGGATTTATCGCTCCCTCTTCCCGAGTGTTCGGAAGAGGTGTTTTAATAGAAGATTCTTGGGCAATAGCAATGAGGTATCTGTCATCATACTTTCTAATTGACATATTCTCAGTCCTCCCACTTCCACAGGTGATGATTCTGATAAACATCCATAAAATTAGAGGTTTGAGATCGTGGAATACAGAGAACTTGCTGAAACTTGCTGTATTATGTCAATTTGTGCCAAGGTTTCTTCGAATCTATCCTCTGTATAAAGAAGTTACAAGGACCTCTGGCATGCTCATTGAAACAGCTTGGGCAGGAGCTGCATTTAATCTCTTTCTCTACATGCTAGCCAGTCATGTATTTGGGTCAATCTGGTACTTATGTTCTGTAGAACGAGAAGCCCAATGCTGGCATGATGCTTGTAGCAAACATCCTGGCTGTAACCTTACTTCCTTGTATTGTGGCTACAATTACAGTCATGAAGGAAACCTATTCCTCAATGCTTCTTGTCCAATCGAAAAGCCAAATGTAGGAATCTTTAACTTTGGAATATTCCTTCAAGCCCTTCAATCTGATATTGGGGAATCACACTTTCCCAAGAAGTTTCTTCACTGCTTTTGGTGGGGCTTAAGGAATCTAAGCGCTTTGGGTCAAAATCTCACTACAAGTACTTGCAAATGGGAAAACTGCTTTGCCATTTTGATTTGCATCTCTGGCCTAGTGTTGTTTGCGTCTCTCCTTGGCAACCTGCAGATGTGTTGGCGATCCACAAAGACAAGGGTGGAGGGGATGAGAGTGAGAAGGAGAGATGTCGAACAATGGATGTCACATCGTTTACTCCCGGAGAATATAAGGGAGCGAGTTCGAAGGTATGAACATTACATGTGGCAGGATACCAGAGGCGCTGATGAACATAATCTGCTGCATAATCTGCCTAAAGACCTCCATAGAGATATTAAGCGCCATCTTTGCTTGGTTTTGCTTATGCGACCAACATGCTTCGGGCGAGGAGACGAAACAGTTGTAGGAAAGCTAGGATGTCCATGCTGCTTCAGAAGCCAGCAGAGCCTGATTTTAGCTTGGAAGACAATAACTCTTAACCATACTGAACATCCATCAGCTGGAGAAACACACCCACGGTACTCCCTGAGATCAATAAGATCGGTTTCAGCAAGCTTTTCCTCTAGTTTTGACAGGCTTACGAGTTTTGGAAACATATATTTCGAACAAGAAATTAGGAGTAAAGGGTTGGGATATATCAAAAGTATTTTTGATAAAAACCCACTACTCCTTCATTTGTGGAATGAAATACTTGTCATGTTGTGTGTGATTGCTACCTCTTTGGATCCTTTGTTCTGTTACATCCTGGTGGTTGATGATGACAAAAGATGTGTCGGATTTGACAAGAAGTTGAGGAAAGTAGCTGTAATTCTTCGCTCGATCACAGACTTACTCTACATAATTCTTATTGTCTGTCATTTTCATCTTGGATATTCCTCATTTTATAATGCAAATAGTGACGATCCTGATGATGGTGTTTGCACAAGAGCATGGAGATTTCTTTTATCCTACTTCACTGTTGATGTTCTCGCAGTTCTTCCACTCCCCCAGGTGGTGAGTTTAATACTCATTCCAAGCCTCAAAGGACACGGATTTATATATGCAGTGAGGTCGCTGAAATATATTCTCGTCGTTCAATATTTGCCGAGGGTCTTTCGAATCTACTCGTTCTTAAAGAAAGTTAGATGGAGTTCTAACATTCTCCCAGAAACTGCTGGGGCTAAAGCTGCATTCAATCTCTTCCTTTATATGCTTGCAAGCCATGTTATTGGAGCATTTTGGTACTTATTCACTATAGAGAGAAAAACAGTTTGCTGGGTAGAAAGGTGTGTACATTGCCCTCTAAACTGTGACTACGTTACAAACGGCAATTCGAGTGCTGACAGTTTTTGCTCTGGAAAACCTGGAAATGAGTCTCAAACTTTTGATTTTGGAATGTTCGAAGTTGGTCTTCGTATTGTGAAATCAAGGAATTTCATGAGGAAAATTTCTTTCTGTTATTGGTGGGGTCTGCAGAAATTGAGCTCATTGGGACAAGACCTCAAAACTAGTGACCATTTGTGGGAAATCTACTTTGCAGTCACCATTACCATTTCTGGGTTGGAGGAAATGAGATTGAAGGGGCAAGATATTGAGCTATGGATGGCTTTCCATTCCCTCCCTAGAAAGTTGAAGAAGAGAATTAAAAAGTACGAACGGTACAAGTGGCGAGAAACCAAAGGTGTTGATGTGGAGCTACTTCTTCATAATCTTCCTAGGGACCTAAGAAGGGACACAAAACGACATCTTTGCTCGACTCCACTCAAAAAAAACTCCTGGGGTACGGTGGGAGCGGTTCCAAGAAGATTTGAGTCTTCTTCTGATACACTTACCAGTTTTGGAAACATTCATTTTAAGGAAGAGTTCAAGAGTAAAGGGTTGAGCTCCATAAAAAGGTCTATTGAAGGAAACTGGATATTCCTTCATCTGTGGAATGATGTACTTGTGATGTTGTGTGTAACTGCAGCCTTACTGGACCCTTTGTTCTGTTACATCTTAGTGGTTGATGATGAAAAAAATTGCATACGCTTTGACAAGAAGTTGAGGATCACAGCCGTAGTTCTACGTTCGCTCATTGATTTTGGCTACATACTTCTCATTGTCTTTCATTTTCGTATCGGTTATACTGACTCAAAGGATGCTAATAACGGAACACTTTCCACAATAGCAACAGCTAGGAGATATCTTTTATCTTACCTTACAGTGGACATTCTTGCTGCTCTTCCTCTTCCACAGGTGATGATAGTATTAGCTGCTCAAGCAGCAAAAGGTTCTCATTTTACAATCTTTATTAGGACATTGAAATTTGTTCTTATCATTCAATATTTGCCAAGGGTGTTTCGAGTGTACTTATTCTTAAAGAAAGTGAGATGGAGTTCTGGGATTTTGCCTGATTCTGCTGCGGCCAAAGCTATATTCAATCTCTTCCTCTATTTGCTTGCCAGTCATGTGTTTGGAGCCTTCTGGTACTTGTTTTCTATTGAGCGCAAAGCAACTTGCTTGCAGTCAAGGTGTCATAGCCATCCATATTGCCCTCGGAAGTATAACATCACTGAGGAGGGATCGTGCTTAGATAATTGCTCTAGAAAAGCATCATCAAATGACACACTACCTTTCAATTTCGGAATATTTGATGATGCCTTCAAGTATGACGTTGTCAATTCCACTGATTTCATATGGAAAGTCTCTTATTGTTATTGGTGGGGTCTGCAAAATCTAAGTTCTCTGGGTCAAGGCCTCAGAACTAGTAAGCATATATGGGAAATTTACTTCGCAGTCTCCATAACCATTGCTGGCTTGGTACTATTTGCACTTCTAATAGGAAATCTGCAGACGTTTCTGCAGTCAACAATTGCGAGACTGGAGGAAATGAGATTGAAGGGGCAAGATATTGAACTATGGATGGCCTACCATTCACTCCCTCGTGATCTAAGGAGGCGGATCAAACTATATGAGAAGTATAAATGGCGGAAAACTAGAGATCCACTTTTATCCACTGTCCCCATCTCCACAAAAACTGTCTCTACACACACCAAAGTGGAAGCATTTGTTTTAAGTGCAAATGATTTGAAGAATGTGGGCTCTAAATTTTGGTGGCTTATCAGTCAAGAGCATGGAAACGATCCCAACTTTAAAGAGCGATGGGCGCCATTGGCTGCTCTTGTGGTGCAAGCTGCATGGCGTCGTTACTTCAAGAGTAAGCGTGAAAGAGGGAAATCTCAGTTAAGCTTAGCCACTGAAAGTGGGAATTCACAGCCTTCAGTCACCACAACCATTCATGCCTCTAGATTCATTGCTCGGTTCCTAAAATCAACTGTTGGCCCTTCAGTTGAGCAGAGTAGAAACCCTATAACACCACTTGGATATGTTGGAACACTGGTCCAGGCATAG 4320 41.23 MNSALLRGLASSSHGIRGIEKSLKSSSCNNLMPQGLRSGKRILDPQGPFLQSWNKIFVLSCVVAVSLDPLFFYVPVIDNRNKCLRLDEKVETVACILRLFTDLFYVVHIVFQFRTGFIAPSSRVFGRGVLIEDSWAIAMRYLSSYFLIDIFSVLPLPQVMILINIHKIRGLRSWNTENLLKLAVLCQFVPRFLRIYPLYKEVTRTSGMLIETAWAGAAFNLFLYMLASHVFGSIWYLCSVEREAQCWHDACSKHPGCNLTSLYCGYNYSHEGNLFLNASCPIEKPNVGIFNFGIFLQALQSDIGESHFPKKFLHCFWWGLRNLSALGQNLTTSTCKWENCFAILICISGLVLFASLLGNLQMCWRSTKTRVEGMRVRRRDVEQWMSHRLLPENIRERVRRYEHYMWQDTRGADEHNLLHNLPKDLHRDIKRHLCLVLLMRPTCFGRGDETVVGKLGCPCCFRSQQSLILAWKTITLNHTEHPSAGETHPRYSLRSIRSVSASFSSSFDRLTSFGNIYFEQEIRSKGLGYIKSIFDKNPLLLHLWNEILVMLCVIATSLDPLFCYILVVDDDKRCVGFDKKLRKVAVILRSITDLLYIILIVCHFHLGYSSFYNANSDDPDDGVCTRAWRFLLSYFTVDVLAVLPLPQVVSLILIPSLKGHGFIYAVRSLKYILVVQYLPRVFRIYSFLKKVRWSSNILPETAGAKAAFNLFLYMLASHVIGAFWYLFTIERKTVCWVERCVHCPLNCDYVTNGNSSADSFCSGKPGNESQTFDFGMFEVGLRIVKSRNFMRKISFCYWWGLQKLSSLGQDLKTSDHLWEIYFAVTITISGLEEMRLKGQDIELWMAFHSLPRKLKKRIKKYERYKWRETKGVDVELLLHNLPRDLRRDTKRHLCSTPLKKNSWGTVGAVPRRFESSSDTLTSFGNIHFKEEFKSKGLSSIKRSIEGNWIFLHLWNDVLVMLCVTAALLDPLFCYILVVDDEKNCIRFDKKLRITAVVLRSLIDFGYILLIVFHFRIGYTDSKDANNGTLSTIATARRYLLSYLTVDILAALPLPQVMIVLAAQAAKGSHFTIFIRTLKFVLIIQYLPRVFRVYLFLKKVRWSSGILPDSAAAKAIFNLFLYLLASHVFGAFWYLFSIERKATCLQSRCHSHPYCPRKYNITEEGSCLDNCSRKASSNDTLPFNFGIFDDAFKYDVVNSTDFIWKVSYCYWWGLQNLSSLGQGLRTSKHIWEIYFAVSITIAGLVLFALLIGNLQTFLQSTIARLEEMRLKGQDIELWMAYHSLPRDLRRRIKLYEKYKWRKTRDPLLSTVPISTKTVSTHTKVEAFVLSANDLKNVGSKFWWLISQEHGNDPNFKERWAPLAALVVQAAWRRYFKSKRERGKSQLSLATESGNSQPSVTTTIHASRFIARFLKSTVGPSVEQSRNPITPLGYVGTLVQA 1439
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
18 11742365 11757160 + Carg20349-RA Car18g01221 166923
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car18g01221 1439 Pfam Ion transport protein 544 830 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Car18g01221 1439 Pfam Ion transport protein 956 1260 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Car18g01221 1439 Pfam Ion transport protein 51 368 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car18g01221 Car-Chr18:11742365 Car12g00767 Car-Chr12:7356547 1.29E-07 dispersed
Car14g01909 Car-Chr14:14674545 Car18g01221 Car-Chr18:11742365 2.69E-83 wgd
Car16g00057 Car-Chr16:383395 Car18g01221 Car-Chr18:11742365 1.85E-23 wgd
Car18g01221 Car-Chr18:11742365 Car02g00918 Car-Chr2:6511197 7.99E-68 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car18g01221 K05391 - csv:101214911 669.848