Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Car18g01246 | ATGGATTTAGATAGTATCGAGTGTGTATCATCTTCCGATGGTCTCGATGAGGATGAGATCCATCTGCATCACACTCTTCATTCTTATTCCCATTCTCATCATCATCCCGAGTTGTCGGCAACCAAGCCTCGAAATGGAAACAATAATAGCGCTGTAGCAGGCCCCACTGCCACTGCGCCGGCCACTAGCGTCCATGAATTGCTCGAGTGCCCTGTCTGTACCAATTCTATGTACCCTCCCATTCATCAGTGCCACAATGGACATACATTATGTTCTACATGTAAAACACGGGTTCATAATCGTTGCCCTACTTGTAGACAAGAGCTTGGAGACATTAGGTGCTTAGCACTGGAGAAGGTGGCAGAGTCACTGGAATTGCCTTGCAGATATTATTCCTTGGGATGCCCAGAAATATTTCCTTACTACAGTAAACTCAAGCACGAAGCATTGTGCAACTTCAGACCCTACAATTGCCCATATGCTGGCTCGGAATGCTCTGCTGTTGGGGATATTCCTTTCCTTGTTTCCCATCTGAGGGATGATCACAAGGTGGACATGCACACTGGATGCACATTTAACCATCGCTATGTGAAATCCAACCCAAGGGAAGTGGAGAATGCCACTTGGATGCTTACGGTTTTTCATTGTTTCGGTCAATACTTCTGCCTTCACTTTGAAGCCTTTCAGCTTGGGATGGCCCCAGTGTATATGGCTTTCCTTCGTTTCATGGGCGACGAGAATGAGGCGCGAACCTACAGCTACAGTCTGGAGGTGGGTGGATATGGGCGAAAACTGATATGGGAGGGCACCCCGCGAAGTATCAGAGATAGCCATCGAAAAGTGAGGGATAGCCATGATGGGCTGATGATTCAAAGAAATATGGCTCTGTTCTTCTCGGGTGGGGATAGGAAGGAACTGAAGCTGAGAGTTACGGGAAGGATATGGAAGGAACAAAACCCGGATGCTGGGGTCTGCATACCCAACCTTATCGAGTGTGTCTCGTCGTCCGATGGTCTCGATGAGGATGACATCCATTTGCACCACACTCTTCATCCTTATTCTCACTCTCATCATCACCCCGAGTTGTCAGCATCGAAGCCTCGTAATGGTAACAACAACAGCGCTGTGAACGCCCCCACTGCCATTGCCATTGCGCCGTCGACTAGCGTCCATGAATTGCTCGAATGCCCTGTCTGCACTAATTCTATGTACCCTCCCATCCATCAGTGCCACAATGGACATACCTTATGTTCTACTTGTAAAACACGGGTTCATAATCGCTGCCCTACTTGTAGACAAGAGCTTGGAGATATTAGGTGCTTAGCACTGGAGAAGGTGGCAGAGTCGCTTGAATTGCCTTGCAAGTATTTTTCCCTCGGATGCCCTGAGATATTTCCGTACTATGGTAAGCTTAAGCATGAGGCTTTATGCAACTTCAGACCCTATAGTTGCCCGTATGCTGGCTCGGAATGCTCTGCTGTTGGGGATATTCCCTTTCTTGTCGCCCATCTGAGGGACGACCACAAGGTGGACATGCACACTGGATGCACATTTAACCATCGTTATGTGAAATCCAATCCAAAGGAAGTGGAGAATGCCACTTGGATGCTTACTGTTTTTCATTGTTTCGGTCAATATTTCTGCCTTCACTTTGAAGCCTTTCAGCTTGGCATGGCCCCAGTCTACATGGCTTTCCTTCGATTCATGGGAGATGAGAATGAGGCACGAACCTACAGCTACAGTCTCGAAGTTGGTGGATATGGGCGAAAACTGATATGGGAGGGTACACCACGAAGTATTCGAGATAGTCATCGAAAAGTCAGGGACAGCCACGATGGATTAATTATTCAAAGAAATATGGCTCTCTTCTTCTCAGGCGGGGATAGAAAGGAACTGAAGCTAAGAGTTACAGGAAGGATATGGAAGGAACAAAACCCAGATGCTGGAGCCTGCATTCCGAACCTTTGTAGCTAA | 1974 | 47.57 | MDLDSIECVSSSDGLDEDEIHLHHTLHSYSHSHHHPELSATKPRNGNNNSAVAGPTATAPATSVHELLECPVCTNSMYPPIHQCHNGHTLCSTCKTRVHNRCPTCRQELGDIRCLALEKVAESLELPCRYYSLGCPEIFPYYSKLKHEALCNFRPYNCPYAGSECSAVGDIPFLVSHLRDDHKVDMHTGCTFNHRYVKSNPREVENATWMLTVFHCFGQYFCLHFEAFQLGMAPVYMAFLRFMGDENEARTYSYSLEVGGYGRKLIWEGTPRSIRDSHRKVRDSHDGLMIQRNMALFFSGGDRKELKLRVTGRIWKEQNPDAGVCIPNLIECVSSSDGLDEDDIHLHHTLHPYSHSHHHPELSASKPRNGNNNSAVNAPTAIAIAPSTSVHELLECPVCTNSMYPPIHQCHNGHTLCSTCKTRVHNRCPTCRQELGDIRCLALEKVAESLELPCKYFSLGCPEIFPYYGKLKHEALCNFRPYSCPYAGSECSAVGDIPFLVAHLRDDHKVDMHTGCTFNHRYVKSNPKEVENATWMLTVFHCFGQYFCLHFEAFQLGMAPVYMAFLRFMGDENEARTYSYSLEVGGYGRKLIWEGTPRSIRDSHRKVRDSHDGLIIQRNMALFFSGGDRKELKLRVTGRIWKEQNPDAGACIPNLCS | 657 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
18 | 11869814 | 11875544 | + | Carg20324-RA | Car18g01246 | 166948 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Car18g01246 | 657 | ProSiteProfiles | Zinc finger SIAH-type profile. | 449 | 509 | IPR013010 | GO:0008270 | |
Car18g01246 | 657 | ProSiteProfiles | Zinc finger RING-type profile. | 396 | 432 | IPR001841 | - | |
Car18g01246 | 657 | MobiDBLite | consensus disorder prediction | 27 | 58 | - | - | |
Car18g01246 | 657 | MobiDBLite | consensus disorder prediction | 41 | 57 | - | - | |
Car18g01246 | 657 | ProSiteProfiles | Zinc finger RING-type profile. | 70 | 106 | IPR001841 | - | |
Car18g01246 | 657 | MobiDBLite | consensus disorder prediction | 351 | 375 | - | - | |
Car18g01246 | 657 | Pfam | Seven in absentia protein family | 438 | 637 | IPR018121 | GO:0005737|GO:0006511|GO:0007275 | |
Car18g01246 | 657 | Pfam | Seven in absentia protein family | 112 | 311 | IPR018121 | GO:0005737|GO:0006511|GO:0007275 | |
Car18g01246 | 657 | ProSiteProfiles | Zinc finger SIAH-type profile. | 123 | 183 | IPR013010 | GO:0008270 |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Car16g00044 | Car18g01246 | CST |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Car08g00096 | Car-Chr8:556330 | Car18g01246 | Car-Chr18:11869814 | 5.07E-165 | dispersed | |
Car17g00506 | Car-Chr17:4494282 | Car18g01246 | Car-Chr18:11869814 | 4.89E-174 | dispersed | |
Car18g00793 | Car-Chr18:9035299 | Car18g01246 | Car-Chr18:11869814 | 3.58E-165 | dispersed | |
Car16g00044 | Car-Chr16:313640 | Car18g01246 | Car-Chr18:11869814 | 0 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Car18g01246 | K04506 | - | csv:101215696 | 662.914 |