Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car18g01255 ATGGGGTCCTCGGGCCAAGGTTGTGAGGTCCAGATCACCCCCACCACCCAAGTGAGCGATGAAGAAGCACAGCTGTTCGCTATGCAGTTGGCGAGCGCTTCGGTTCTTCCAATGGTGCTGAAGGCCGCCATCGAGCTAGACGTGCTGGAGATCATTGCGGCGGCAGGGGAGGGGGCTTTGTTGTCCCCCTCACAAATTGCCTCTCACCTCTCCTTCTCCGGGGCCAAAACCCCAAACCCTGAGGCGGGTGTGGTTCTGGACCGCATGCTCCGGTTGCTGGCTTCCTACTCCATCCTCACTTACTCCCTCAATACTCTCCCCGATGGCTCACTCCAGAGGCTCTACGGCCTCGCCCCTGTAGCCAAGTTCTTGGTCAAGAATCAAGACGGCGTCTCCATCGCTCCCCTGTGTCTCATGAACCAGGACAAGGTCCTCATGGAGAGCTGGTACCATTTGAAAGATGCGGTACTGGAAGGAGGGATTCCATTCAACAAAGCATACGGAATGACGGCGTTCGAATATCATGGAACAGATCCGAGATTCAACAGGGTGTTCAACAGGGGAATGTCCGACCATTCCACCATTACCATGAAGAAGATTCTAGAGACCTACAAAGGCTTCGAAGGCCTTAATTCAGTGGTGGATGTGGGCGGTGGGACAGGAGCTGTTCTCAACATGATAGTCTCCAAGTACCCTTCTATTAGGGGCATCAACTTCGACCTCCCTCATGTCATTCAGGATGCCCCTGCCTACCCAGGCGTCCAACATGTTGGGGGCGACATGTTTGTGAGCGTCCCAAAGGGGGATGCTATTTTCATGAAGTGGATCTGTCACGATTGGAGCGACCAGCACTGCCTGAAATTGTTGAAGAATTGCCACGATTCTCTGCCGGAGCATGGGAAGGTGATTGTGGCGGAATGCATTCTTCCGGTTGCACCAGACAGCAGCCTTGCCACCAAGGGAGTGATTCACATCGATGTCATAATGCTGGCTCACAACCCTGGAGGCAAAGAAAGGACCGAGCAGGAGTTCCACGCCTTGGCCAAGGCTGCTGGATTTCAAGGCTTCAAGGTCCACTCTTGTGCTTTCAACACATACGTCATGGAATTTCTCAAGACTCTTTAG 1125 53.69 MGSSGQGCEVQITPTTQVSDEEAQLFAMQLASASVLPMVLKAAIELDVLEIIAAAGEGALLSPSQIASHLSFSGAKTPNPEAGVVLDRMLRLLASYSILTYSLNTLPDGSLQRLYGLAPVAKFLVKNQDGVSIAPLCLMNQDKVLMESWYHLKDAVLEGGIPFNKAYGMTAFEYHGTDPRFNRVFNRGMSDHSTITMKKILETYKGFEGLNSVVDVGGGTGAVLNMIVSKYPSIRGINFDLPHVIQDAPAYPGVQHVGGDMFVSVPKGDAIFMKWICHDWSDQHCLKLLKNCHDSLPEHGKVIVAECILPVAPDSSLATKGVIHIDVIMLAHNPGGKERTEQEFHALAKAAGFQGFKVHSCAFNTYVMEFLKTL 374
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
18 11913618 11915808 - Carg20314-RA Car18g01255 166957
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car18g01255 374 Pfam Dimerisation domain 38 94 IPR012967 GO:0046983
Car18g01255 374 Pfam O-methyltransferase domain 149 354 IPR001077 GO:0008171
Car18g01255 374 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 28 372 IPR016461 GO:0008168
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car06g00358 Car-Chr6:1969541 Car18g01255 Car-Chr18:11913618 9.28E-81 dispersed
Car18g01255 Car-Chr18:11913618 Car02g00097 Car-Chr2:613250 1.19E-70 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car18g01255 K13066 - csv:101204109 637.491