Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car19g00047 ATGGCTGGAGATGGATTTGGATTCCCTGTGGAATCTCAGGCGGTTTCGGTGAAGAAGAAGACGGTGGCGACCACCACGACCACGACGAAGAAGAAGAATACTGTAGTTTCCAGGAGCTGGGTTTCGTTGGACCATGAAGGAAGGACTACGGTTTTGGACGTGGATAAGTATGCTATTATGCAGAGAGTTCAGATTAATGCGAGAGATCTTCGGCTTCTTGATCCTCTGTTGTCGTATCCTTCCACTATCTTGGGGAGAGAAAGCGTGATTGTTCTCAATTTGGAGCACATCAAGTCAATAATCACTGCAGACGAGGTGCTGCTTAGAGACCCAATGGATGAAAATGTAGTTCCAATTGTTGAAGAATTGCAGAGACGGTTGCCTTCCACAAATTCCCTGTACCAAGGACAAGGGGAAGAAGAAGAGCCTTCCACCACCCAAAATGAGTTGGCTGAAAACGAATTTCCATTTGAGTTTCGTGCCTTAGAGGTCGCATTAGAAGCAATTTGTAGTTTTCTTGATGCACGCACAAGAGAACTGGAGACTGATACGTATCCTGCTTTAGATGAGCTGACCTCCAAGATTAGCAGTCGTAACTTGGATCGAGTGCGCAAGCTGAAGAGTGCAATGACAAGGTTGACAAATCGGGTGCAAAAGGTTAGGGATGAACTTGAACAACTTCTGGATGACGACGACGACATGGCGGAGCTTTACTTGTCACGAAAAGTAGCTGGCACCCCTGAAAGCGGCTCTGGGACTCCAATTTGGTTTCTTGCTTCTCCTAAGGACTATTCAAAGATGTCTAAAACAAGTAGAGCAAGTGCAATTACTTTTCGAGGAGAGAATGATGTTGAGGAACTAGAAATGTTACTCGAGGCTTATTTTATGCAGATTGAAGGTACATTAAACAAACTAATCACGTTGCGGGAATACATCGATGACACAGAGGATTACATCAATATTCAGCTTGACAATCACAGGAATCAACTGATTCAGCTTGAACTCTTTTTGAGCTCTGGGACTGTTTGTTTGTCTATTTATTCTTTAGTGACTGCGATATTTGGAATGAATATCCCATATACCTGGAAGGAAGATCATGAACATGTATTCAAATGGGTGGTCATCCTGACAGGAATAGTTTGTGCAACCATTTATGTGTCACTAAGCTCGTATGCACGATCCAAAGGTCTTGTTGGATCTTGA 1203 43.64 MAGDGFGFPVESQAVSVKKKTVATTTTTTKKKNTVVSRSWVSLDHEGRTTVLDVDKYAIMQRVQINARDLRLLDPLLSYPSTILGRESVIVLNLEHIKSIITADEVLLRDPMDENVVPIVEELQRRLPSTNSLYQGQGEEEEPSTTQNELAENEFPFEFRALEVALEAICSFLDARTRELETDTYPALDELTSKISSRNLDRVRKLKSAMTRLTNRVQKVRDELEQLLDDDDDMAELYLSRKVAGTPESGSGTPIWFLASPKDYSKMSKTSRASAITFRGENDVEELEMLLEAYFMQIEGTLNKLITLREYIDDTEDYINIQLDNHRNQLIQLELFLSSGTVCLSIYSLVTAIFGMNIPYTWKEDHEHVFKWVVILTGIVCATIYVSLSSYARSKGLVGS 400
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
19 324073 328553 + Carg16855-RA Car19g00047 167014
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car19g00047 400 Pfam CorA-like Mg2+ transporter protein 286 385 IPR002523 GO:0016020|GO:0030001|GO:0046873|GO:0055085
Car19g00047 400 MobiDBLite consensus disorder prediction 128 148 - -
Car19g00047 400 Coils Coil 203 230 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car19g00047 Car-Chr19:324073 Car19g00399 Car-Chr19:5901130 9.62E-60 dispersed
Car17g00166 Car-Chr17:1027434 Car19g00047 Car-Chr19:324073 1.30E-176 wgd
Car19g00047 Car-Chr19:324073 Car08g00995 Car-Chr8:6846508 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car19g00047 K16075 - csv:101220452 697.197