Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car19g00066 ATGGAATCCTCTTATTTTTCGTTCTCCGATTCCGATTTCTCGACGGGATCTTCGTTCGGATCGGCCGAATCGTCGTTCTCATGGAGCGAATTTTTCCCGATTCCACTGCCGGATGAGTTTCTCGGAAATCAAACGGAATCGGAATCGAAAATTGCGGTGAAGGAAGAAATCGAAGTGAGTTCGATCGATTTCGCGGAGGAGAAACAGAGGAAGACGACGGCGGAGAAGAGTTACAGAGGAGTAAGGCGACGGCCATGGGGAAAATACGCGGCGGAGATTAGGGATTCAACGAGGCATGGAGTTAGGGTTTGGCTTGGAACATTTGATAGCGCGGAAGCCGCCGCCTTAGCGTATGATCAAGCGGCATTTTCAATGAGAGGAGCACTGGCGGTTCTGAATTTTCCGGTGGAAATGGTGAGGGAATCACTCCAGGATCTTAAGTATCAACTGGAAGAAGGTTGCTCGCCGGTGGTGGCTTTGAAGAGAAAACACTCTCTGAGAAGGAAGTCGGCGGCGGCGGCGGCGGTGGAGAAGAAGAAGATGAAGAAGAAGAAGAATATGGTGATTTTTGAAGATTTGGGAACAGAGTATTTGGAAGAACTGTTGATGCTAAGTTCATATGAGAGTTGTAGCATCAATCCCTTCTGA 648 48.61 MESSYFSFSDSDFSTGSSFGSAESSFSWSEFFPIPLPDEFLGNQTESESKIAVKEEIEVSSIDFAEEKQRKTTAEKSYRGVRRRPWGKYAAEIRDSTRHGVRVWLGTFDSAEAAALAYDQAAFSMRGALAVLNFPVEMVRESLQDLKYQLEEGCSPVVALKRKHSLRRKSAAAAAVEKKKMKKKKNMVIFEDLGTEYLEELLMLSSYESCSINPF 215
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
19 572150 572797 + Carg16875-RA Car19g00066 167033
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car19g00066 215 Pfam AP2 domain 77 127 IPR001471 GO:0003700|GO:0006355
Car19g00066 215 MobiDBLite consensus disorder prediction 1 23 - -
Car19g00066 215 ProSiteProfiles AP2/ERF domain profile. 77 135 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car08g00270 Car-Chr8:1688509 Car19g00066 Car-Chr19:572150 6.05E-59 dispersed
Car19g00066 Car-Chr19:572150 Car07g00173 Car-Chr7:1007293 6.92E-31 dispersed
Car17g00147 Car-Chr17:921956 Car19g00066 Car-Chr19:572150 1.60E-21 wgd
Car19g00066 Car-Chr19:572150 Car02g01500 Car-Chr2:9715850 1.73E-100 wgd
Car19g00066 Car-Chr19:572150 Car06g01142 Car-Chr6:8477035 2.42E-21 wgd
Car19g00066 Car-Chr19:572150 Car08g00961 Car-Chr8:6422238 3.48E-47 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
5241 PF00847 AP2 1.10E-14 CL0081 Car TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car19g00066 K14516 - csv:101220325 243.047