Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car19g00095 ATGGATTTCAACTCCCAAATGGTTTTTTCCACCATTTTCCTCTGTTTTCTTTTGCTTCAAGTTCAAGCAAACGCTTCCAATCTCCAAACTTACATGATTCAACTCCATCCACAAGGATTAACCAGCTCTGTTTTCGAATCTAAGCTTCAATGGCATCTTTCTTTTCTTGAACAAACGCTATCTGTTGAAGAAGACTGTTCTTCTCGCTTGCTTTATTCATATTCGAACGCCATGGAAGGATTTGCAGCTCAGTTATCTGAAACTGAGCTTGAGTATTTGAAGAAGTTGGCTGATGTTGTGGCTGTAAGAGCTGATAGAAAGTATGAAATTCAGACAACTTATTCACATAAGTTCTTGGGGCTTAGTGTTTGCACACAAGGTGTTTGTTATAAGTCCTCAATGGGCCAAGGGGCAATCGTTGGGGTTCTTGACACGGGAGTTTGGCCTGAGAGTCCAAGCTTTAGTGATTCCAAAATGCCCCCAATTCCACAAAAATGGCGAGGGGGTTGCCAAGAAGGGCAAGATTTTAATTCCTCAAGTTGTAATAGGAAACTCATTGGTGCTAAGTTCTTCATCAAAGGACATCATGTGGCTTCGTCGCCGCCTTCCGATATCGTCCAGGAATATGTCTCCCCAAGAGACTCCCATGGCCATGGGACTCACACTTCTTCTACAGCTGCTGGAGCTTCGGTTGCCGGAGCGAGCGTATTTGGTAATGGAGCAGGTGTGGCGCAGGGGATGGCCCCGGGCGCCCACATTGCTGTGTACAAGGTTTGCTGGTTTAGTGGCTGCTATAGCTCTGATATTGTAGCGGCCATGGATTCCGCAATAAGAGATGGTGTTGACATTCTCTCCCTTTCGCTTGGTGGCTTCCCACTTCCGTTTTTCGACGACAGTATCGCCATTGGCAGTTTTCGAGCAATGCAGCATGGCATCTCAGTCATTTGTGCAGCAGGAAACAATGGCCCAACTCAAAGCTCTGTCGCCAATGTAGCTCCTTGGATCACCACCATTGGTGCAGGCACGCTCGATCGAACATTCCCAGCTATAGTTCGACTAAGCAATGGCGAAGCCATTCCCGGCGAATCAATGTACCCTGGAAACAAGTTCAATCAAGCTACCAAGGAGCTTGAGTTGGTTTACTTGACTGGAGGGAAAATGGGAAGTGAACTTTGCTTAAAAGGGTCTCTTCCACGAGAACAAGTAGAAGGAAAAATGGTGGTTTGCGACCGTGGCGTCAACGGCCGATCCGAAAAGGGGCAGATTGTGAAGGAATCTGGAGGAGCTGCTATGATCCTTGCAAATACAGAGATAAATCTAGAGGAAGACTTGGTCGATGTTCATGTTTTGCCGGCCACGTTGATCGGATTTGCGGAGGCGAATCGGTTAAAAGCTTACATTAACACAACAACCGATCCAAAAGCCCGAATCCAATTTGGAGGAACTGTGATAGGAAGAACAAGAGCTCCATCTGTAGCTCAGTTTTCATCAAGAGGACCAAGCCCCACAAATCCTTCAACGCTCAAACCTGATGTAATTGCTCCTGGGGTCAACATTATAGCAGCTTGGCCTCAAAACCTTGCTCCAACTGGCCTTCTAGAAGATTCTAGAAGGTCAAACTTCACTGTCATGTCAGGAACATCCATGTCTTGTCCCCATGTCAGTGGAATTGCAGCTCTAATCCATTCAGCTCATCCAAAATGGACACCGGCAGCTATCAAATCAGCCATCATGACAACCGCCGATGTTACCGATCGTTTCGGGAAACCGATTCTCGATGGCAACAAACCAGCTAGTGTTTTTGCAATGGGAGCTGGTCATGTAAACCCAACAAGAGCCATTGATCCTGGCTTGGTCTATGATATCAAGCCATATGATTATGTCATTCATCTTTGTGTTCTTGGCTACACTCATTCAGAAATCTTCATCATTACCCACATGAATGTGAGCTGCCACAAAGTTCTTCAGATGAACAAAGGCTTCACATTGAACTATCCCTCCATGTCTGTCGTTTTTAAGCACGGGACAACGAGTAAGATGGTTTCGAGATGGTTGACGAATGTCGGGAGCCCGAATTCCGTCTATGAAGTGGAAGTAACCGCGCCTGAAGGAGTGAGCGTTCAAGTTAAGCCTCGGCGCTTGGTGTTCAAACATGTGAACGAAAGTTTGAGTTATAAG 2178 46.24 MDFNSQMVFSTIFLCFLLLQVQANASNLQTYMIQLHPQGLTSSVFESKLQWHLSFLEQTLSVEEDCSSRLLYSYSNAMEGFAAQLSETELEYLKKLADVVAVRADRKYEIQTTYSHKFLGLSVCTQGVCYKSSMGQGAIVGVLDTGVWPESPSFSDSKMPPIPQKWRGGCQEGQDFNSSSCNRKLIGAKFFIKGHHVASSPPSDIVQEYVSPRDSHGHGTHTSSTAAGASVAGASVFGNGAGVAQGMAPGAHIAVYKVCWFSGCYSSDIVAAMDSAIRDGVDILSLSLGGFPLPFFDDSIAIGSFRAMQHGISVICAAGNNGPTQSSVANVAPWITTIGAGTLDRTFPAIVRLSNGEAIPGESMYPGNKFNQATKELELVYLTGGKMGSELCLKGSLPREQVEGKMVVCDRGVNGRSEKGQIVKESGGAAMILANTEINLEEDLVDVHVLPATLIGFAEANRLKAYINTTTDPKARIQFGGTVIGRTRAPSVAQFSSRGPSPTNPSTLKPDVIAPGVNIIAAWPQNLAPTGLLEDSRRSNFTVMSGTSMSCPHVSGIAALIHSAHPKWTPAAIKSAIMTTADVTDRFGKPILDGNKPASVFAMGAGHVNPTRAIDPGLVYDIKPYDYVIHLCVLGYTHSEIFIITHMNVSCHKVLQMNKGFTLNYPSMSVVFKHGTTSKMVSRWLTNVGSPNSVYEVEVTAPEGVSVQVKPRRLVFKHVNESLSYK 726
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
19 776790 778973 - Carg16904-RA Car19g00095 167062
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car19g00095 726 ProSitePatterns Serine proteases, subtilase family, serine active site. 546 556 IPR023828 -
Car19g00095 726 Pfam Peptidase inhibitor I9 30 110 IPR010259 -
Car19g00095 726 Pfam PA domain 378 463 IPR003137 -
Car19g00095 726 Pfam Fibronectin type-III domain 663 726 IPR041469 -
Car19g00095 726 ProSiteProfiles Serine proteases, subtilase domain profile. 113 614 - -
Car19g00095 726 Pfam Subtilase family 135 606 IPR000209 GO:0006508|GO:0008236
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car19g00095 Car-Chr19:776790 Car10g00692 Car-Chr10:3589429 0 dispersed
Car19g00095 Car-Chr19:776790 Car02g01468 Car-Chr2:9579646 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car19g00095 - - csv:101222839 1285.78