Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car19g00146 ATGTTTGATTCCTTCTTATTCTTCTTCTTGTTGTTGTTGATTGTATTCCCTCACTGTAAATCTTCTGAAATTTCCGCCGGTGGTCGGAGATTGCTTCACCAGCCATTTTTTCCGATTGATTCAGCTCCTCCGGCGGAGCAGCCATCACCTCCGGTACCGCCACCGCCGAATCCCAAATACCCATTTTCCACTACCCCTCCTGCAACACCTGATGGGTCACCATTCTTTCCGACGTATCCTGCAACTCCACCTCCTCCAGCGCCGGCGAGTTTAGCCTCGTTTCCGGCTAATATATCTTCTCTGAATCTACCTCATTCGTCTGGTTACAGTTCCAAGAAGGTTGTTCCGTTGGTTATTGCTGGGGTTGTTTCCGCCGTCTTGGTAATCTGCATTGTAGGGTTTTTGTTCTGGCGGCGGCGGCGGGGTGGTCGTGGATTGGGCGATGGAAAGACGTATAGATCGGAGGATAGTAGCCGGTTGTCTCTGGTTCAGAATGTTGAAGTCGGTAATGGAATCCCTAAGTTGAGAAATCCGTCGGCTACTAGCTCTGAGTTTCTGTATTTAGGTACTCTTGTAAGCACGAGAGGGATCGACGAACGTTCCGTTGGCGGAGCTCGTGTTGTTGGTTCTAGGCCGTTGGATTCGCCGGAGCTTCATCCGCTTCCGCCGCTGAATCTAGGTCGGACGAATGAGAAGAAAAATCGCGAAAATGGAGAGGAGAAATCGATTGGAGATGAAGAGGAAGAGGAATTTTACTCTCCGAAAGGTTCTCTCGGCGCGATTGGATCGGGATCTCGACGAGTTCTCGCAACAATGGCGGCGGAAGATTTGCTTGGCAAAACCAGCGATTCGAGCTCGACTTCGTGTTCTACATCTAGCGGTTCCATTTCGCCGGCGAGGTCATGTTCTAAGAGTCTCTCTCTATCTCCACCGGCGAGTATGAGCCCTAGAAGATCCGTTCAACATGCGGAGCAGGTTGCCCACGGCGGAGGCGAATCAGACGGCGGCGTTAAATCTCATTGTCCATCTCCAATGCGTTTAGCGACGGAGAAGAACTCCACCGCATCTTCTTCCCGGAGATTTTCAAATGCTTCAATTCTCAGTGCGATTTTCCCGAATTTATCAACCGATAAGGATTTAGTTCATCGGAATTCAGATCCAGGCGAGCAGTTTCCTTCTTCTCCTTGTTTATTTCCTCTTTCAGATGGAATTTTAGGGCAAATTCAGATTCAACCGCCGATAGTTTCAAACGTTCCTGATTCGGATTCCGATGCAAAACTTAAGCAATTTCCTTACTCATTTACTTCATCTTCACCTTCATCGTCACCGGAACGAGTAGTTCTGGACTCTTCTCCGTCAAGAACCTCCATTATTTCCGATCAAACCAGGTCTTCTCCACCATCACCAGAGAGAATTCTCAACCATTTTGATCAAGATGTGAAATCTTCTTCTAATGTGGCTCCTCCACCACCTCCACCACCGCCTCCGCCACCACCAGCACCACTGGTTGCACTACCAGGACGCAGACAAAAGCCGATTTCTCCTAAAACACCAATGGATCAACCCATTACAAAGGCGTCTCCTCCATTAGTGCCTCCATTAAAGCCATTTCAAATGAAGAATCTGAAAAATGTATCACCAATTCAGCTGCCATCTTGCAAAAGCAATGGTGAATCATCTGAAGATACCCCCAAGCCCAAATTGAAGCCATTGCATTGGGATAAAGTAAGGGCTAGCTCTGATCGTGAGATGGTGTGGGATCAACTCAGATCAAGCTCTTTTAAAGTGAATGAGGAAATGATTGAAACTCTGTTTGTTGTGAACACTTCCAACTCCAAGGAGACAACTCCACGTCCAGTGTTTCCGACACCTAACCAAGAGATCGGAGTTCTCGATCCGAAGAAGTCGCAGAACATTGCGATTGCGTTACGAGCGCTTAATGTGACGATAGAAGAAGTTTGTGATGCCCTTTTAGAAGGTAATGCAGAAGCACTTGGAATAGAGCTACTTGAAAGCTTATTGAAAATGGCTCCAACAAAAGAAGAAGAACGCAAGCTAAAGGCATCCAAGGATGCCTCACCTACAAAATTTGGCCCAGCTGAGAAGTTTTTGAAGGCAATCCTTGATGTTCCTTTTGCATTCAAAAGGGTGGATGCAATGCTTTACATGGCAAATTTCGAGTCCGAGATCGAGTACCTAAAGAAGTCATTCGAAAATCTCGAGACTGCTTGTGAAGAATTGAGGAACAGCAGGATGTTCTTGAAACTTTTAGAAGCTGTACTCAAGACAGGGAATCGTATGAACGTTGGCACGAACCGTGGCGATGCCCACGCGTTCAAACTCGACACGCTTTTAAAACTTGTTGATGTCAAGGGTGCAGATGGAAAAACCACTCTTCTACATTTCGTCGTACAAGAAATCATAAGAAGTGAAGGCGCTCGTCTTTGTAACACGAGTTCTCCAAACTCGAACCCGAATGACGATATCAAATGCAGGAAACTCGGTCTGCAAGTTGTTTCGAGTCTTAGCTCAGAGCTCACCAACGTAAAGAAGGCTGCCTCGATGGATTCCGACGTGCTCAATGGCGAGGTCGTTAAGCTTTCGAGAGGACTCAACAACATTAGGGAGGCTCTACGTCTCAACGAAGCAGATGGACGAAACGATAGCACGGAAAAGTTCTCGTACTCGATGAGTAGATTCTTGAAAATGGCAGAAGAGGAACTGATTAGAATCCAAGCTCAGGAAAGTGTTGCATTATCTCTAGTAAAGGAGATCACTGAGTACTTCCATGGCAACTCTGCCAAGGAAGAAGCTCATCCATTTAGAATTTTCATGGTGGTTCGAGATTTCCTAACGGTTCTGGACGGAGTTTGCAAAGAAGTCGGGACGATAAACGAGCGGACGATCGTGAGTTCGGCTCATAAATTCCCGGTTCCGGTGAATCCGACATTACCACAAGCATTTCAAGCTCATCATAGAGTGCAGAAATACAGTTCTTCTGATGAAGAATGA 3012 46.71 MFDSFLFFFLLLLIVFPHCKSSEISAGGRRLLHQPFFPIDSAPPAEQPSPPVPPPPNPKYPFSTTPPATPDGSPFFPTYPATPPPPAPASLASFPANISSLNLPHSSGYSSKKVVPLVIAGVVSAVLVICIVGFLFWRRRRGGRGLGDGKTYRSEDSSRLSLVQNVEVGNGIPKLRNPSATSSEFLYLGTLVSTRGIDERSVGGARVVGSRPLDSPELHPLPPLNLGRTNEKKNRENGEEKSIGDEEEEEFYSPKGSLGAIGSGSRRVLATMAAEDLLGKTSDSSSTSCSTSSGSISPARSCSKSLSLSPPASMSPRRSVQHAEQVAHGGGESDGGVKSHCPSPMRLATEKNSTASSSRRFSNASILSAIFPNLSTDKDLVHRNSDPGEQFPSSPCLFPLSDGILGQIQIQPPIVSNVPDSDSDAKLKQFPYSFTSSSPSSSPERVVLDSSPSRTSIISDQTRSSPPSPERILNHFDQDVKSSSNVAPPPPPPPPPPPPAPLVALPGRRQKPISPKTPMDQPITKASPPLVPPLKPFQMKNLKNVSPIQLPSCKSNGESSEDTPKPKLKPLHWDKVRASSDREMVWDQLRSSSFKVNEEMIETLFVVNTSNSKETTPRPVFPTPNQEIGVLDPKKSQNIAIALRALNVTIEEVCDALLEGNAEALGIELLESLLKMAPTKEEERKLKASKDASPTKFGPAEKFLKAILDVPFAFKRVDAMLYMANFESEIEYLKKSFENLETACEELRNSRMFLKLLEAVLKTGNRMNVGTNRGDAHAFKLDTLLKLVDVKGADGKTTLLHFVVQEIIRSEGARLCNTSSPNSNPNDDIKCRKLGLQVVSSLSSELTNVKKAASMDSDVLNGEVVKLSRGLNNIREALRLNEADGRNDSTEKFSYSMSRFLKMAEEELIRIQAQESVALSLVKEITEYFHGNSAKEEAHPFRIFMVVRDFLTVLDGVCKEVGTINERTIVSSAHKFPVPVNPTLPQAFQAHHRVQKYSSSDEE 1003
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
19 1276446 1281383 - Carg27237-RA Car19g00146 167113
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car19g00146 1003 MobiDBLite consensus disorder prediction 433 569 - -
Car19g00146 1003 MobiDBLite consensus disorder prediction 542 559 - -
Car19g00146 1003 MobiDBLite consensus disorder prediction 485 505 - -
Car19g00146 1003 MobiDBLite consensus disorder prediction 208 259 - -
Car19g00146 1003 MobiDBLite consensus disorder prediction 279 359 - -
Car19g00146 1003 ProSiteProfiles Formin homology-2 (FH2) domain profile. 558 980 IPR015425 -
Car19g00146 1003 Coils Coil 723 750 - -
Car19g00146 1003 Pfam Formin Homology 2 Domain 560 954 IPR015425 -
Car19g00146 1003 MobiDBLite consensus disorder prediction 43 74 - -
Car19g00146 1003 MobiDBLite consensus disorder prediction 279 320 - -
Car19g00146 1003 MobiDBLite consensus disorder prediction 433 471 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car09g00837 Car-Chr9:5101705 Car19g00146 Car-Chr19:1276446 3.89E-119 dispersed
Car11g00952 Car-Chr11:6191174 Car19g00146 Car-Chr19:1276446 2.42E-118 dispersed
Car19g00146 Car-Chr19:1276446 Car10g00964 Car-Chr10:9110351 5.37E-115 dispersed
Car02g00366 Car-Chr2:2711218 Car19g00146 Car-Chr19:1276446 9.97E-06 transposed
Car04g01894 Car-Chr4:11087285 Car19g00146 Car-Chr19:1276446 4.31E-18 transposed
Car19g00146 Car-Chr19:1276446 Car02g01415 Car-Chr2:9295637 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car19g00146 - - cmos:111464076 1719.13