Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car19g00151 ATGTCTCTCCTCAGTAGATTCTTTTACAGAAGGCCCCCGGATGGGTTGCTGGAATTTGTTGAACGAGTATATATTTTTGACTCGTGCTTTTCTACTGAAGTATTGCCTGATGATATGTACCAAATATATCTGCACGAAATCATAAACGAATTACATGAAGAATTCCCGGAGTCCTCTTTTCTTGCTTTTAATTTTCGTGAAGGGGAGAAACGGAGCCAATTTTCACAAATGTTGTGCGAGTATGATGTCACTGTGATGGATTATCCTCGACAATATGAAGGTTGCCCGCTTCTACCGCTGTCGTTAATACAGCACTTCCTCCATGTTTGTGAAAGTTGGCTTCTGCTAGGTAACCAACAAAATGTCATTCTTCTCCACTGTGAGAGGGGAGGTTGGCCACTGTTAGCATTCCTTTTGGCTAGCTTTTTGATATTTAGAAAACTGCACAGTGGTGAGAGGAAAACTCTTGAAATTGTTCATCGAGAAGCTCCCAAAGGGTTTTTGCAGCTCTTGTCACCATTAAATCCTTTCCCATCTCAGCTCCGCTACTTGCAATATGTTGCAAGGAGAAATATAGTCTCTGAGTGGCCACCACCTGAGCGAGCGCTTTCTTTAGATTGTGTAATTCTTCGTGGCATTCCGGGTTTTGATTCTCAGAATGGCTGCAGACCAGTTGTTCGTATTTTTGGGAGGAATCTTTTTAGTAAGGGTGGGCTTTCCACGCAGATGATTTTCTCTATGCCCAAGAAGAACAAGGCCCTCCGTCACTACCATCAGGCAGAGTGCGATGTGATTAAAATAGACGTTCAGTGTTTGGTTCAAGGAGATGTAGTGTTGGAGTGTTCACATTTGGAACCAGAACAAGAAAGGGAAGTTATGATGTTTCGTATTATGTTCAATACAGCGTTTATTCGATCAAACATACTGATGCTAACCTCTGAAAATTTGGACATTCTTTGGGATTCAAAGGAGCGTTATCCAAAAGGCTTTCGAGCTGAGGTTCTGTTTGGAGAGATGGAAAGCATCTCCCCTCCAAGGGCTCCAACCACAATTTTGAATGGTGAAGAGAAAGGTGGATTACCAATTGAAGCTTTTTCCAGGGTTCAAGAACTTTTTAGTGGTGTTGAGTGGATTGATAACAATGATGATGCTGCCTTGTGGCTACTCAAGAATCTTTCTGCCTTGAGTGATGTGAAGGAATTGTCAAGATTGCAAAATAAAACAAGTTCATACTCCTCACCAGTGGATTCTGAAGAGGAAAATAATACATCTAGCACTGCCGATAGTTTAGATGAAGTATTTGATACTATTACAAGGCCTGTGGTTGATTCAACTTCTACCAATTTTACAATTCCAGCTACGGTACATTCTTCTGAATTATTGTCCGACAAGATTGGTGCTAATGAAGTGAATATTTCATCAGAGTCTCCTCAACTTTTTGATGAATTTCAAGATGAGATATCTTCGAATAAAGAACCTCCATTAACTTCTTTTGGCTCCTCAATCCCTCCTATAAGTTCTTCTTTGATGTCATCGCCACTGTTGCCTCCATCTAATCTACCATCAACTAATGCTAGTGGGGAACTTGTCTCAAATAAAATGACACCCACTGTTGAAGTAATTCCTCCTCCACCACCACCGCCGCCGCCACCTTTTTCCCTGTCTCATAATGAACCTCATGTAGAAACTTCCATCAGTTCAAATTTGACTACCATAACAATGCATGGGAGACCCCCTCCACCACCTCCACCTCCACCTCCACCTCAATATACTACTGGTACCAATCCTGTTGAAGCCTCTTTGACTCATTCACTGTCGCTTGTTCCTAAAACTTCGGGTGCTCCTCCACCCCCACCTCCCCCTCCTCCTCCCCCTCCACAAGTTGTTGGTCCACCTCCACCTATTTCTAATTCCTCCAGTTCTCCACTTCCTCCTCCACCTCCGCCTCCAGTTCCAAAATCTTTTGGTACTCCTCCACCTCCACCTCCACCTCCGCCTCCGCTTCTAAAATCTTCTAGCGCTCCTCCACCTCCACCTCCACCTCCCCCTCCTCTTCTAAAATCTTCTAGTGCTCCTCCACCTTCACCTCCACCTCCACCTCCACCTCCGCCTCCAATTCCAAAACTTTCTGTTGCTCCTCCACCTCCACCTCCACCTCCAAAACTTTCTGGTGCTCCTCCACCTCCGCCTCCACCTCCAAAACTTTCTGGTGCTCCTCCGCCTCCGCCTCCGCCTCCAAAGTTTTCTGGTGCTCCTCCGCCTCCGCCTCCGCCTCCAAAACTTTCTGGTGCTCCTCCGCCTCCGCCTCCGCCTCCTAAACTTTCTGGTGCTCCTCCACCTCCACCTCCACCTCCACAATCAAATCGCGGTGCACCGGTTCCACCTCCTCCACCACCAAGACCTCCCAGTGTTGAGCTACCAAGTCATGGTACTAAACCAACTAGACCTCCTCCACCTCCTCCACCGGCAAAGTCCTCTAATGCTCACCCTCCGTCAAGTCATGGTGCTACACCAATGCCACCCCCTCCCCCCGGATCAAGAGGGCCAAATGTACCACCACCACCTCCTCCTTCTGTTGGAAGAGGCAAAGCTTCTCTAGGGTCAACAACTCAAGGAAGAGGCCGTCTTGCTACTGGAGTTGTAAATGCTCCAAAAAAAACCACTTTAAAACCATTGCACTGGGTAAAAGTTACTCGAGCAATGCAAGGCAGTTTGTGGGCTGATTCACAAAAGCAGGAAAATCAATCAAGGGCCCCAGAAATAGACATCTCTGAACTTGAAAGTCTATTCTCAGCAGCCTCTGCTTCTGATGGGAGTGGTAGTAAAGGTGGAGGACGACGTGGTTCCAATATCAACAAACCGGAAAAAGTGCAACTGATTGACCTGCGAAGAGCATATAACTGTGAAATAATGCTCTCAAAAATAAAGATTCCCTTACCGGATATGATAAATTCAGTTCTTGCATTGGATTCTTCTGCTCTTGATATTGACCAGGTTGAGAATCTCATCAAGTTTTGTCCTACCAGGGAAGAGATGGAAACGTTGAAGAATTATACAGGTGACAGACAAATGCTAGGAAAGTGCGAGCAGTTTTTTCTTGAGCTAATGAAGGTCCCACGAATAGAGTCCAAGTTACGAGTGTTTGCTTTCAAAATAACCTTTTCTAGTCAGGTGAATGATTTGAGATACAACTTGAACACAATAAATGATGCTACAAGAGAGGTCAAAGAATCTGCAAAATTGCGTCAGATAATGCAAACAATTCTGACACTGGGAAATGCGTTAAACCAGGGCACTGCTCGAGGCTCTGCTATAGGTTTTAAGTTGGACAGCCTCCTTAAATTGTCTGACACTCGGGCAAGAAACAACAAAATGACTTTGATGCATTATTTGTGTAAGCTCATTGCAGAAAAAATGGCGGAATTACTTGATTTTGACAAGGACCTTGTTCATTTAGAAGCTGCCTCTAAGATTCAATTGAAAGCATTGGCTGAGGAAATGCAAGCAGTGAGTAAAGGTCTTGAAAAGATGGAGCAAGAGCTAACTGCTTCAGAAAATGACGGTGCTATCTCTATTGGTTTCCAGAAGGTGCTGAAGATTTTTCTTGATACGGCTGAAGCTGAAGTAAGGGCACTTATTTCCTTATATTCTGAAGTGGGGAGAAACGCAGATTCGCTATCCCAGTACTTCGGCGAGGATCCAGCTCGGTGCCCCTTTGAGCAAGTGACTCAAATTTTGATAGTCTTTGTTAAGATGTTCAAGAAGTCTCGAGAAGAAAACGAAAGACAGGCTGATGCTGAAAAGAGAAAAATAGAGAAGGAAGCCAGTCCAATAGATTGA 3840 44.79 MSLLSRFFYRRPPDGLLEFVERVYIFDSCFSTEVLPDDMYQIYLHEIINELHEEFPESSFLAFNFREGEKRSQFSQMLCEYDVTVMDYPRQYEGCPLLPLSLIQHFLHVCESWLLLGNQQNVILLHCERGGWPLLAFLLASFLIFRKLHSGERKTLEIVHREAPKGFLQLLSPLNPFPSQLRYLQYVARRNIVSEWPPPERALSLDCVILRGIPGFDSQNGCRPVVRIFGRNLFSKGGLSTQMIFSMPKKNKALRHYHQAECDVIKIDVQCLVQGDVVLECSHLEPEQEREVMMFRIMFNTAFIRSNILMLTSENLDILWDSKERYPKGFRAEVLFGEMESISPPRAPTTILNGEEKGGLPIEAFSRVQELFSGVEWIDNNDDAALWLLKNLSALSDVKELSRLQNKTSSYSSPVDSEEENNTSSTADSLDEVFDTITRPVVDSTSTNFTIPATVHSSELLSDKIGANEVNISSESPQLFDEFQDEISSNKEPPLTSFGSSIPPISSSLMSSPLLPPSNLPSTNASGELVSNKMTPTVEVIPPPPPPPPPPFSLSHNEPHVETSISSNLTTITMHGRPPPPPPPPPPPQYTTGTNPVEASLTHSLSLVPKTSGAPPPPPPPPPPPPQVVGPPPPISNSSSSPLPPPPPPPVPKSFGTPPPPPPPPPPLLKSSSAPPPPPPPPPPLLKSSSAPPPSPPPPPPPPPPIPKLSVAPPPPPPPPKLSGAPPPPPPPPKLSGAPPPPPPPPKFSGAPPPPPPPPKLSGAPPPPPPPPKLSGAPPPPPPPPQSNRGAPVPPPPPPRPPSVELPSHGTKPTRPPPPPPPAKSSNAHPPSSHGATPMPPPPPGSRGPNVPPPPPPSVGRGKASLGSTTQGRGRLATGVVNAPKKTTLKPLHWVKVTRAMQGSLWADSQKQENQSRAPEIDISELESLFSAASASDGSGSKGGGRRGSNINKPEKVQLIDLRRAYNCEIMLSKIKIPLPDMINSVLALDSSALDIDQVENLIKFCPTREEMETLKNYTGDRQMLGKCEQFFLELMKVPRIESKLRVFAFKITFSSQVNDLRYNLNTINDATREVKESAKLRQIMQTILTLGNALNQGTARGSAIGFKLDSLLKLSDTRARNNKMTLMHYLCKLIAEKMAELLDFDKDLVHLEAASKIQLKALAEEMQAVSKGLEKMEQELTASENDGAISIGFQKVLKIFLDTAEAEVRALISLYSEVGRNADSLSQYFGEDPARCPFEQVTQILIVFVKMFKKSREENERQADAEKRKIEKEASPID 1279
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
19 1331078 1340664 - Carg27242-RA Car19g00151 167118
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car19g00151 1279 MobiDBLite consensus disorder prediction 509 884 - -
Car19g00151 1279 MobiDBLite consensus disorder prediction 557 574 - -
Car19g00151 1279 MobiDBLite consensus disorder prediction 932 952 - -
Car19g00151 1279 Pfam Formin Homology 2 Domain 884 1254 IPR015425 -
Car19g00151 1279 ProSiteProfiles C2 tensin-type domain profile. 200 339 IPR014020 -
Car19g00151 1279 MobiDBLite consensus disorder prediction 1256 1279 - -
Car19g00151 1279 MobiDBLite consensus disorder prediction 538 555 - -
Car19g00151 1279 MobiDBLite consensus disorder prediction 593 609 - -
Car19g00151 1279 Coils Coil 1254 1274 - -
Car19g00151 1279 MobiDBLite consensus disorder prediction 406 428 - -
Car19g00151 1279 Coils Coil 1160 1187 - -
Car19g00151 1279 MobiDBLite consensus disorder prediction 834 860 - -
Car19g00151 1279 MobiDBLite consensus disorder prediction 932 946 - -
Car19g00151 1279 MobiDBLite consensus disorder prediction 509 533 - -
Car19g00151 1279 MobiDBLite consensus disorder prediction 575 592 - -
Car19g00151 1279 MobiDBLite consensus disorder prediction 611 827 - -
Car19g00151 1279 Pfam C2 domain of PTEN tumour-suppressor protein 199 337 IPR014020 -
Car19g00151 1279 ProSiteProfiles Formin homology-2 (FH2) domain profile. 879 1279 IPR015425 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car10g00436 Car-Chr10:2176912 Car19g00151 Car-Chr19:1331078 2.51E-143 dispersed
Car11g00171 Car-Chr11:942519 Car19g00151 Car-Chr19:1331078 3.41E-116 dispersed
Car13g00929 Car-Chr13:9535938 Car19g00151 Car-Chr19:1331078 5.68E-31 dispersed
Car19g00151 Car-Chr19:1331078 Car09g00837 Car-Chr9:5101705 3.56E-36 dispersed
Car19g00151 Car-Chr19:1331078 Car02g01412 Car-Chr2:9268644 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car19g00151 - - cmos:111464075 1157.13