Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Car19g00157 | ATGGAGCGGAACTATCCGTTTGAGAATGGAGTGATGATGACGAGAGACACGAAGCCAAGACTGAGATGGACTGCTGATCTTCACGACCGTTTTGTAGACGCGGTCACCAAACTCGGTGGCCCTGAAAAAGCAACTCCCAAGTCTGTGTTAAGATTGATGGGTTTAAAGGGCTTGACTTTGTACCACTTGAAGAGTCATTTACAGAAGTATAGACTTGGACTGCAAACTCGAAAGCAAAATGTGGCTGAGCAAAGGAATGAAAGTAGTGGGACTCTGAGCAACTTCATTGGAGTTGAGGAAGATGAGAGAGGGATGAAAATTGCTGAGGCACTAAAATCACATGTTGATGTGCAGAAAACAATACTAGAACAACTAGAGGTACAAAATAAACTACAAATGAGAATAGAAGCTCAAGGAAAATACTTGCAAGATATCTTAGAGAAAGCACAAAAGAGTCTGGCACTTGCCATTAACAGTGACCTTGGTAGTCTTGAAAGCACAGGAATGCAGTTATTAGGCTTTGACGTGGCTTTGTCAGATCAAATGGAAAAAAGTAAGAAACAAGAAATGAGAGGAAGCATGACGACTGTAAACGATACTTGTAAGAAGACGGGCGACTCACCCATCGAGATGTGCAAAGTGGAAGCTGGAGAAGAAGACACAAACGAGTTTAATGTTGAAAGGAATATGATCAACTTTGATTTGAATTCAAAAGGTGGCTATGATTACAGTTCGAATGGGGCTGAAGTACTTGAGGCCAATGTGCTTCCTTGTTCGAGGTAA | 783 | 41.89 | MERNYPFENGVMMTRDTKPRLRWTADLHDRFVDAVTKLGGPEKATPKSVLRLMGLKGLTLYHLKSHLQKYRLGLQTRKQNVAEQRNESSGTLSNFIGVEEDERGMKIAEALKSHVDVQKTILEQLEVQNKLQMRIEAQGKYLQDILEKAQKSLALAINSDLGSLESTGMQLLGFDVALSDQMEKSKKQEMRGSMTTVNDTCKKTGDSPIEMCKVEAGEEDTNEFNVERNMINFDLNSKGGYDYSSNGAEVLEANVLPCSR | 260 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
19 | 1434362 | 1439204 | - | Carg25325-RA | Car19g00157 | 167124 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Car19g00157 | 260 | Pfam | Myb-like DNA-binding domain | 21 | 71 | IPR001005 | - | |
Car19g00157 | 260 | Pfam | MYB-CC type transfactor, LHEQLE motif | 105 | 152 | IPR025756 | - | |
Car19g00157 | 260 | ProSiteProfiles | Myb-type HTH DNA-binding domain profile. | 15 | 75 | IPR017930 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Car14g01006 | Car-Chr14:8203681 | Car19g00157 | Car-Chr19:1434362 | 3.93E-47 | dispersed | |
Car19g00157 | Car-Chr19:1434362 | Car19g00887 | Car-Chr19:9140555 | 1.38E-49 | dispersed | |
Car19g00157 | Car-Chr19:1434362 | Car02g01405 | Car-Chr2:9240796 | 3.91E-132 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
5247 | PF00249 | Myb_DNA-binding | 2.70E-07 | CL0123 | Car | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Car19g00157 | - | - | cmax:111466876 | 504.982 |