Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car19g00158 ATGTTTAGGACAATGGCACCACTGCTAAACGATCAGTTCAGTTTTCAAACGCCAGAAAGTCAGACTGTCCAGACTAAAAAAATCCCCAACAAGTATCCTGGCTGGTATTCACCAGATACAGGAATTTGTCGTAGTGTCCATGCCTCTAGAGACTTGCCCACTGATCCATTTCTTGATGTTGCCTCTTATATCCTCTCCTTCCAACACAATGGTCGTTCAGCTCTCATTGATTCCTCCACTGGACATTCAATATCTTACAGGGAATTGTATCGTATGGTGAATTCCATGGCTTCTGGGCTCCAAAAATTGGGTGTTTCACAAGGGGATGTAGTCTTGCTTCTGTTACCAAATTCCATTTTCTATCCCATTGTTCTTCTGGGTGTGCTGTATTTGGGAGCTGTTATTACAACCATGTTTCCTCAAAGCAGTTCTCAAGAAATCAAGAAACGAATCAGTGAATGCAATGTGCGGCTGGCTTTTGCAACACCACAGAATGTTGGGAACTTTGAAGCATTGGGAGTTCAGGCAATTGGAGTACCAGAAAATACGAATTTGGACTTAATGAGGCCTATGGGATTTTCTTCTTTTTATGAGCTTATTTCAGGTGGTTTTGATTTGAATAAAAGACCTGTGATTAGACAGGAAGATACAGCTGCTATATTGTTTTCTTCTGGTACGACTGGAGTGAGCAAAGGGGTTTTGTTGACACATAGAAACTTTATATCTACGGTCGAGCTTTTTGTTCGGTTTGAAGCTTCGCAGTATGAGTATTTGACTACAGAGAATGTGTATTTGGCTGCTATACCAATGTTTCATGTGTATGGTCTCTCCATTTTTGTGATGGGATTATTGTCATTGGGTTCTAGTATTGTTGTAATGAGCAAATTCGATGTCAAAGAGGTGGTCGTGGCCATTGATAGATTTAAAGTTACACATTTTCCTGTTGTTCCGCCAATAATGATAGTTATGGCTAGGACTGCAGTGAAATTTGGTGGGCACAAATTTCGTAGTTTGAAACAGGTTTCTTGTGGGGCTGCTTCTTTGAGTAAGAAGATCATAGGGGATTTTGTGCAGGCTCTCCCTCATGTTGACTTCATTCAGGGATATGGCATGACTGAAACCACAGCCGTAGGCACCCGTGGCTTCAATACCAAAAAGGCTCAAAATTATTTGTCTGTTGGACTTTTAGCACCAAACATGGAAGCTAAAGTTGTTGATTGGGTTAGCGGATCTATCATGCCGCCTGGTAAAACCGGCGAACTTTTGTTACGCGGACCTGGTTTAATGAAAGGGTACTTGAATAATCCCGAGGCAACAATGTCCACAATAGACCAAGAAAATTGGCTACATACTGGAGACATCGTCTACTTTGACCGAGATGGATACTTGTATGTTGTTGATCGTTTGAAGGAGGTTATAAAGTATAAGGGCTTTCAGATCGCTCCTACTGATTTGGAATCAGTGGTGATCACACATCCAGAAGTTCTTGATACTGCAGTAGCTGCGGCCGAAGATGAAGAATGTGGGGAGATTCCAGTGGCATTTGTGGTGAAAAAGCCAGGAAGCTCACTCTCACAGAAAGATGTCATCGATTATGTTGCTCAACAGGTTGCGCCATATAAAAAGATCAGAAAAGTGGTGTTTACAGAATCGATACCCAAATCTGCTGCTGGCAAAGTACTGCGTAAGGAACTGGGGAAGCACTTGCCTTCTAAACTCTGA 1722 42.1 MFRTMAPLLNDQFSFQTPESQTVQTKKIPNKYPGWYSPDTGICRSVHASRDLPTDPFLDVASYILSFQHNGRSALIDSSTGHSISYRELYRMVNSMASGLQKLGVSQGDVVLLLLPNSIFYPIVLLGVLYLGAVITTMFPQSSSQEIKKRISECNVRLAFATPQNVGNFEALGVQAIGVPENTNLDLMRPMGFSSFYELISGGFDLNKRPVIRQEDTAAILFSSGTTGVSKGVLLTHRNFISTVELFVRFEASQYEYLTTENVYLAAIPMFHVYGLSIFVMGLLSLGSSIVVMSKFDVKEVVVAIDRFKVTHFPVVPPIMIVMARTAVKFGGHKFRSLKQVSCGAASLSKKIIGDFVQALPHVDFIQGYGMTETTAVGTRGFNTKKAQNYLSVGLLAPNMEAKVVDWVSGSIMPPGKTGELLLRGPGLMKGYLNNPEATMSTIDQENWLHTGDIVYFDRDGYLYVVDRLKEVIKYKGFQIAPTDLESVVITHPEVLDTAVAAAEDEECGEIPVAFVVKKPGSSLSQKDVIDYVAQQVAPYKKIRKVVFTESIPKSAAGKVLRKELGKHLPSKL 573
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
19 1448505 1458007 + Carg25326-RA Car19g00158 167125
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car19g00158 573 Pfam AMP-binding enzyme 68 475 IPR000873 -
Car19g00158 573 ProSitePatterns Putative AMP-binding domain signature. 220 231 IPR020845 -
Car19g00158 573 Pfam AMP-binding enzyme C-terminal domain 485 559 IPR025110 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car14g00203 Car-Chr14:969482 Car19g00158 Car-Chr19:1448505 3.30E-131 dispersed
Car18g00217 Car-Chr18:1225556 Car19g00158 Car-Chr19:1448505 7.84E-132 dispersed
Car18g00637 Car-Chr18:7678813 Car19g00158 Car-Chr19:1448505 7.87E-102 dispersed
Car19g00158 Car-Chr19:1448505 Car09g00060 Car-Chr9:292585 1.88E-149 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car19g00158 K01904 - csv:101219578 952.199