Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car19g00198 ATGGAGCTTGAAAACCCTAATGCATTCAAGTTTATTTCAATAGTTGCCACACCCGCCGCCGCCGCCTCTCCACCTGATTCTCAATCGTGTCATGACACCGAATCTCATCATCTCGCCACCGATACGGTGGCGTCTCGCCGACCACGCGGTCGTCCACCCGGTTCCAAAAACAAACCAAAGCCACCGGTCATCATAACTCGAGAAAGCGCAAATACCCTAAGAGCTCATATTCTCGAGATCGGCGGTGGCTGCGACGTCTTCGATAGTATCGCTTCCTACGCTCGCCGCCGTCAGCGTGGGATCTGCATCTTGAGTGGCAGTGGAACGGTAACGAATGTCAACTTACGACAACCGACCGCGGCGGGATCTGTGTTAACCCTACAAGGTAGGTTTGAGATATTATCGCTCACTGGATCTTTCTTACCGCCACCAGCTCCTCCCGGCGCTACCAGTTTGACCATATACTTGGCTGGTGGGCAAGGGCAAGTGGTCGGCGGTAACGTCGTCGGAGAATTGATGGCGGCCGGACCAGTGACGGTGATCACCGCTTCGTTTACGAATGTAGCATACGAGAGATTGCCACTGGAAGACGAAGAACAAGAACAAGAACAAGAAAGAACAAGATCAGGTTCAGATGCAACCACCGACATCGCACGGAAACAATAA 666 52.7 MELENPNAFKFISIVATPAAAASPPDSQSCHDTESHHLATDTVASRRPRGRPPGSKNKPKPPVIITRESANTLRAHILEIGGGCDVFDSIASYARRRQRGICILSGSGTVTNVNLRQPTAAGSVLTLQGRFEILSLTGSFLPPPAPPGATSLTIYLAGGQGQVVGGNVVGELMAAGPVTVITASFTNVAYERLPLEDEEQEQEQERTRSGSDATTDIARKQ 221
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
19 1863338 1866505 - Carg24516-RA Car19g00198 167165
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car19g00198 221 MobiDBLite consensus disorder prediction 21 63 - -
Car19g00198 221 Pfam Plants and Prokaryotes Conserved (PCC) domain 74 187 IPR005175 -
Car19g00198 221 MobiDBLite consensus disorder prediction 192 221 - -
Car19g00198 221 ProSiteProfiles PPC domain profile profile. 70 208 IPR005175 -
Car19g00198 221 MobiDBLite consensus disorder prediction 30 44 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car17g00053 Car-Chr17:269123 Car19g00198 Car-Chr19:1863338 2.46E-78 dispersed
Car19g00198 Car-Chr19:1863338 Car15g00111 Car-Chr15:651206 4.00E-68 dispersed
Car16g01091 Car-Chr16:9371877 Car19g00198 Car-Chr19:1863338 6.86E-83 wgd
Car19g00198 Car-Chr19:1863338 Car02g01367 Car-Chr2:9050395 1.45E-86 wgd
Car19g00198 Car-Chr19:1863338 Car06g00585 Car-Chr6:3358808 1.51E-76 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car19g00198 - - csv:101219835 265.774