Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car19g00212 ATGGCGAAAGTTTGTTTCATTTTGGTTGTAATTACGGTGGTGGTGGTGCTTGGCTTTGCTGCCTCGACCGTGCACGGTCAAGGCACACGGCTCGGGTTCTACCGTGCCAAGTGCCCGAATGCTGAATCCATCACGGGTGGATTAAGATGGGAAGTTCCGACCGGACGACGAGATGGCAGAATTTCATTGGTTTCAGAAGTGAACTTGCCAAGTTTTTCAGATTCCATTGAAGTTCAAAAAGAGAAATTTAGGGTAGTGGGTCTCGACACTCATGACCTCGTCACCCTCGCAGGATCTCATACGATCGGAACGGCGTCATGTCGTTTTTTCAGTTACAGACTCTACAACTTCACGACCGCCACCAAAAGTGGCGCCGATCCAACCATTAACCCATCGCTTGTCGGTCGGCTACGAGAACTTTGCCCCGAAGACGGAGATGGCTCGAACCGAGTCGAGCTTGACATCGGTAGTCCCGAAAAGTTCGACCTATCGTTCTACTCAAACTTGAGGCGTGGGGGCGGGATATTAGAGTCCGATCAGAAGCTATGGAATGATGACTCAACTCGGCCGACCGTCCGACACTACTTGGGTTCGAGGATTCTAAGGGGACGTTCTAGCTTTAGAGTTGAGTTTGGGAAATCAATGGTGAAAATGAGCAACATTGACGTTAAAACTGGCATCGAGGTTCCAAGCCGAGGTACGCATGTCGGGTTCTACTCGACGACATGCCCACAAGTCGAGGCTATTGTTAGAGCAACTGTGAAGTCTCATTTTCGATTAGATCCAACGGTGGCTCCTGGGTTATTGAGAATGCACTTCCACGACTGCTTTGTACGAGGATGTGATGCTTCTGTGCTCCTTGTCGGTCCGAGAACCGAGAGAGCAGCACTGCCCAACCTCTCTTTAAATGGGTTTGAGGTTATTAACGATGCTAAATCTCGCCTCGAACGTGCTTGTCCTGGTATTGTCTCTTGTGCTGATATTCTTGCCCTAGCTGCTCGTGACTCGGTGGTTTTGACAAAAGGAGTGAGTTGGGGAGTGCCGACAGGACGTAGAGATGGAAGGGTTTCGTTGGCTTTGGAGGCTAACAATGCTCTACCTAAGGTCAATGATACCATTCAAACTCAAAGGAAGTTATTTAAGAGCAAAGGTCTCAATATTCAAGATCTTGTCACTCTAGTTGATCCAGCCATGAACCCATCCTTTGTTCATCAGCTACGAACACTTTGCCCCAAAAATGGAGAAGGCTCACCCAATATTGGACTCGACATAAGCACTCCCAACCAATTTGACACATCTTTCTTCTCAAACTTGAGGAATGGGCGTGGGGTCTTGGAGTCTGATCAGAAGCTGTGGAACGATCCCTCGACTCGGGCTTTCGTTCGACGTTTCTTGCTCAAAGGTTCGTTGGGTTTGAACTTCGACCTCGAGTTTGGGAAATCTATGGTTAAGATGAGCAACATTGGAGTCAAGACGGGAACTCGAGGTGAAATTCGGAAGATTTGCACTATGGTTAACTAG 1521 48.45 MAKVCFILVVITVVVVLGFAASTVHGQGTRLGFYRAKCPNAESITGGLRWEVPTGRRDGRISLVSEVNLPSFSDSIEVQKEKFRVVGLDTHDLVTLAGSHTIGTASCRFFSYRLYNFTTATKSGADPTINPSLVGRLRELCPEDGDGSNRVELDIGSPEKFDLSFYSNLRRGGGILESDQKLWNDDSTRPTVRHYLGSRILRGRSSFRVEFGKSMVKMSNIDVKTGIEVPSRGTHVGFYSTTCPQVEAIVRATVKSHFRLDPTVAPGLLRMHFHDCFVRGCDASVLLVGPRTERAALPNLSLNGFEVINDAKSRLERACPGIVSCADILALAARDSVVLTKGVSWGVPTGRRDGRVSLALEANNALPKVNDTIQTQRKLFKSKGLNIQDLVTLVDPAMNPSFVHQLRTLCPKNGEGSPNIGLDISTPNQFDTSFFSNLRNGRGVLESDQKLWNDPSTRAFVRRFLLKGSLGLNFDLEFGKSMVKMSNIGVKTGTRGEIRKICTMVN 506
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
19 2050965 2056583 + Carg24502-RA Car19g00212 167179
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car19g00212 506 ProSiteProfiles Plant heme peroxidase family profile. 233 506 IPR002016 GO:0004601|GO:0006979|GO:0020037
Car19g00212 506 ProSiteProfiles Plant heme peroxidase family profile. 40 237 IPR002016 GO:0004601|GO:0006979|GO:0020037
Car19g00212 506 Pfam Peroxidase 43 196 IPR002016 GO:0004601|GO:0006979|GO:0020037
Car19g00212 506 Pfam Peroxidase 250 464 IPR002016 GO:0004601|GO:0006979|GO:0020037
Car19g00212 506 ProSitePatterns Peroxidases active site signature. 265 276 IPR019794 GO:0004601
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car19g00212 Car-Chr19:2050965 Car02g01006 Car-Chr2:7084113 1.13E-18 dispersed
Car19g00212 Car-Chr19:2050965 Car19g00213 Car-Chr19:2057936 9.88E-07 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car19g00212 K00430 - csv:101217567 394.43