Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car19g00217 ATGAGCGGGCGGATCGTGAGCCGAGAGGATCCGGTGCAGTCGGAGCGGCACAGCGAGGCAGGCAGCGTTGCACCACCTTCGAAGGTGGGCGTGCCGCCGAGGAAGAACGCGTGGGAGGAGTTTAAATCTGTGGTGAATGAGACTTTCTTCTCCGATCAGCCTCTTAGGCATTTCAAGGACCAGCCCAAGCGCAAGAAAGTTGCTCTCTTTGTGCAAGGCCTCTTCCCTGTGTTCCAATGGGGACGGGGATATAACTTCAGTAAGTTCAAAGGGGACCTCATTGCTGGCTTAACCATTGCTAGTCTTTGTATTCCTCAGGATATTGGATATGCCAAGCTTGCCAATTTGCCAGCTGAAAATGGACTTTATAGTAGCTTTGTCCCACCATTGGTCTACGCAGTGATGGGAAGCTCTAGAGACATAGCAATCGGCCCGGTCGCAGTCGTGTCACTTTTACTCGGAACACTCCTATCGCAGGTATACGACCCGGTGAAAGAAGCCGAAGAATACAAACGGCTAGCTTTCACGGCAACTTTCTTCGCCGGAGTAACTCAGCTAGCTCTAGGCTTCCTCCGGCTAGGATTCTTGATCGACTTTCTATCACATGCTGCGATTGTTGGGTTCATGGGTGGCGCCGCTGTCACCATCGCCCTCCAACAGCTGAAAGGTCTTCTCGGCATAAAAAACTTCACCAAGAAAACTGATATCATTTCAGTGATGCGCTCAGTTTGGAGTAATGTGCAGCATGGGTGGAATTGGCAGACTATACTGATAGGGGTATCATTTTTGGCGTTCCTTTTAGCTACCAAATATATCGGCAAGAAGCATAAGAAACTGTTTTGGATACCTGCCATTGCGCCCTTGACATCGGTGATACTCTCAACTTTTTTTGTGTATATCACTCGAGCTGATAAAGATGGAGTTCAGATTGTAAAACACATAGATAAAGGAATAAATCCACCATCCCTTGATAAGATCTTCTTCCATGGAGACAATCTCACCAAAGGTTTCAAAATTGGAGTGGTTGCTGGTTTGATTGCCCTCACGGAAGCTGTGGCCATTGCAAGAACATTCGCAGACTTAAAGGACTACGAGATCAATGGTAACAAAGAAATGATGGCTCTTGGCACCATGAACATTGCTGGCTCCATGACTTCTTGCTATGTAGCCACAGGATCATTCTCCCGGTCGGCTGTGAACTACATGGCTGGCTGCAGCACACCGATGTCGAACATCGTCATGGCATGCGTCGTTCTCTTGACCTTAGAGCTCATCACACCCCTTTTCAAGTATACCCCTAATGCCATTCTCGCCTCCATCATCATTTGCGCCGTGATTGGGCTCATCGACATCGACGCCGTGATATTGCTATGGAAGATCGATAAATTCGACTTCATTGCTTGCATGGGAGCTTTCTTCGGCGTCGTCTTTGATTCGGTCGAGATTGGTCTTCTCATTGCTGTGAGTTTGTCGCTGTTCAAAATTCTATTGCAAGTGACGAGACCTCGCATTGCTTTGCTTGGGAAGCTCCCAAAGATTGCCATTTTTAGAAACATTTTGCAATACCCTGGGGCAAAGAGGATTGATGGAATCCTCATGGTTAGGGTTGATTCTTCAATATACTTCTCCAATGCCAACTATGTCAAAGAAAGGATACTGAGATGGCTAGCAGATGAAACAGAGAAGCTCAAAGACCAATCTCTCCCCATCAAAGTCGTGGTCATCGACATGTCTCCGGTAAACGATATCGACACGAGCGGCATCCATGCGATTGAGGGATTGTACTCTCATTTGCAGAAGAAGGAAATTGAGCTTGCACTTGCAAATCCAGGTCCAGTGATAATGGAGAAGCTCTTAGCTGCAAACTTCGACAAGCTCATTGGAGAAGACAACATTTTCCTTAGTGTCAACGAAGCTATTAAGACTTATGCCCCAAATGCGGCTCTTGATCCTTAA 1956 47.19 MSGRIVSREDPVQSERHSEAGSVAPPSKVGVPPRKNAWEEFKSVVNETFFSDQPLRHFKDQPKRKKVALFVQGLFPVFQWGRGYNFSKFKGDLIAGLTIASLCIPQDIGYAKLANLPAENGLYSSFVPPLVYAVMGSSRDIAIGPVAVVSLLLGTLLSQVYDPVKEAEEYKRLAFTATFFAGVTQLALGFLRLGFLIDFLSHAAIVGFMGGAAVTIALQQLKGLLGIKNFTKKTDIISVMRSVWSNVQHGWNWQTILIGVSFLAFLLATKYIGKKHKKLFWIPAIAPLTSVILSTFFVYITRADKDGVQIVKHIDKGINPPSLDKIFFHGDNLTKGFKIGVVAGLIALTEAVAIARTFADLKDYEINGNKEMMALGTMNIAGSMTSCYVATGSFSRSAVNYMAGCSTPMSNIVMACVVLLTLELITPLFKYTPNAILASIIICAVIGLIDIDAVILLWKIDKFDFIACMGAFFGVVFDSVEIGLLIAVSLSLFKILLQVTRPRIALLGKLPKIAIFRNILQYPGAKRIDGILMVRVDSSIYFSNANYVKERILRWLADETEKLKDQSLPIKVVVIDMSPVNDIDTSGIHAIEGLYSHLQKKEIELALANPGPVIMEKLLAANFDKLIGEDNIFLSVNEAIKTYAPNAALDP 651
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
19 2118407 2124549 - Carg24570-RA Car19g00217 167184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car19g00217 651 MobiDBLite consensus disorder prediction 1 32 - -
Car19g00217 651 Pfam Sulfate permease family 89 469 IPR011547 GO:0016021
Car19g00217 651 ProSiteProfiles STAS domain profile. 521 643 IPR002645 -
Car19g00217 651 Pfam STAS domain 522 639 IPR002645 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car04g01189 Car-Chr4:6832847 Car19g00217 Car-Chr19:2118407 0 dispersed
Car19g00217 Car-Chr19:2118407 Car17g01133 Car-Chr17:8699382 0 dispersed
Car19g00217 Car-Chr19:2118407 Car15g00671 Car-Chr15:3743521 0 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car19g00217 K17470 - csv:101202746 1172.92