Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car19g00252 ATGGCTTCCTTCCATGCAGAAGCTTCCGAGTCTAGCAATGTTGATTACACTCAACGAGCTCAGTGGCTCCGAGCCGCAGTTCTCGGAGCCAACGACGGGCTCGTCTCCGTTGCATCGCTGATGATGGGCGTCGGCGCTGTGAAGCCCGACGCCAAAGCCATGCTTATTGCTGGATTTGCGGGGATGGTAGCGGGCGCTTGTAGTATGGCGATCGGAGAGTTCGTGTCGGTTTACACGCAATATGATATACAGAAAGCTCAGCTGAAGAGAGATAGGAAGCAAAAGAATGACATGCAGTCAAGCCAGTCGGCCGAGGAGGAAGAGAAGCTACCAAATCCGTTACAGGCCGCACTTGCATCAGCGATAGCTTTTACGGTCGGAGCGGTTATTCCGTTGCTGTCGGCAGTGTTTATACGAGACCACAAGGTAAGGCTCGGGGTGGTTGCAGCGGTGGCGAGCTTGACGTTGGTGGTTTTTGGAGGAGTTGGAGCCGTCCTAGGGAGGACTCCGGTGGGGAAATCGGCGGCGAGAGTGGTTGTTGGAGGGTGGATGGCAATGGGCATCACTTTTGGGCTTACAAAGCTGCTGGGGTCGAAGGGGCTGTGA 606 55.45 MASFHAEASESSNVDYTQRAQWLRAAVLGANDGLVSVASLMMGVGAVKPDAKAMLIAGFAGMVAGACSMAIGEFVSVYTQYDIQKAQLKRDRKQKNDMQSSQSAEEEEKLPNPLQAALASAIAFTVGAVIPLLSAVFIRDHKVRLGVVAAVASLTLVVFGGVGAVLGRTPVGKSAARVVVGGWMAMGITFGLTKLLGSKGL 201
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
19 2782198 2782803 + Carg28154-RA Car19g00252 167219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car19g00252 201 MobiDBLite consensus disorder prediction 89 104 - -
Car19g00252 201 Pfam VIT family 23 103 IPR008217 GO:0005384|GO:0030026
Car19g00252 201 Pfam VIT family 98 193 IPR008217 GO:0005384|GO:0030026
Car19g00252 201 MobiDBLite consensus disorder prediction 89 109 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car15g00555 Car-Chr15:3060715 Car19g00252 Car-Chr19:2782198 1.84E-82 dispersed
Car19g00252 Car-Chr19:2782198 Car04g02354 Car-Chr4:18932856 1.81E-89 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car19g00252 K22736 - csv:101214875 320.472